RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CAPN7Q9Y6W3 813 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
BRCA1-209ENST00000470026 TISP43B9A030 160 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 H0YIN7 160 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 PLSCR1O15162 318 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 MARCKSL1P49006 195 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 QPCTQ16769 361 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 ERMARDQ5T6L9 678 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 FBXW10Q5XX13 1052 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 AADACL2Q6P093 401 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 FBXO25Q8TCJ0 367 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-209ENST00000470026 TMEM117Q9H0C3 514 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 PCIF1Q9H4Z3 704 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 KCNH7Q9NS40 1196 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 HSPBP1Q9NZL4 362 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 TMOD2Q9NZR1 351 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 BCCIPQ9P287 314 aaKnown RBP eCLIP14.71□□□□□ -0.05
BRCA1-209ENST00000470026 UBIAD1Q9Y5Z9 338 aa14.71□□□□□ -0.05
BRCA1-209ENST00000470026 TULP1O00294 542 aaPredicted RBP14.71□□□□□ -0.06
BRCA1-209ENST00000470026 CAND2O75155 1236 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 SHBGP04278 402 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 CYP1A2P05177 515 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 COMTP21964 271 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 GCLMP48507 274 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 NCKAP1LP55160 1127 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 SIX1Q15475 284 aaPredicted RBP14.71□□□□□ -0.06
BRCA1-209ENST00000470026 ODF2Q5BJF6 829 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 TNFAIP8L3Q5GJ75 292 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 SWT1Q5T5J6 900 aaKnown RBP14.71□□□□□ -0.06
BRCA1-209ENST00000470026 TTC27Q6P3X3 843 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 NOP9Q86U38 636 aaKnown RBP14.71□□□□□ -0.06
BRCA1-209ENST00000470026 SHC3Q92529 594 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 C18orf8Q96DM3 657 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 KREMEN1Q96MU8 473 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 RUNDC3BQ96NL0 473 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 CEP89Q96ST8 783 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 FAM129AQ9BZQ8 928 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 AGO4Q9HCK5 861 aaKnown RBP14.71□□□□□ -0.06
BRCA1-209ENST00000470026 COL20A1Q9P218 1284 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 ZNF70Q9UC06 446 aaPredicted RBP14.71□□□□□ -0.06
BRCA1-209ENST00000470026 PARP2Q9UGN5 583 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 SNX24Q9Y343 169 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.06
BRCA1-209ENST00000470026 RGPD3A6NKT7 1758 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-209ENST00000470026 RGPD4Q7Z3J3 1758 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 TCP10L2B9ZVM9 353 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 SGPL1O95470 568 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 ICAM1P05362 532 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 DRD4P21917 467 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 MMP13P45452 471 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 IFT88Q13099 833 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 GRIPAP1Q4V328 841 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 ADAT2Q7Z6V5 191 aaKnown RBP14.7□□□□□ -0.06
BRCA1-209ENST00000470026 CROCCP2Q86T23 111 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 C12orf50Q8NA57 414 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-209ENST00000470026 CLEC4DQ8WXI8 215 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 KAT5Q92993 513 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 ADAM7Q9H2U9 754 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 QTRT2Q9H974 415 aaKnown RBP14.7□□□□□ -0.06
BRCA1-209ENST00000470026 TRPC6Q9Y210 931 aa14.7□□□□□ -0.06
BRCA1-209ENST00000470026 CCDC169A6NNP5 214 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 RPL21P46778 160 aaKnown RBP14.69□□□□□ -0.06
BRCA1-209ENST00000470026 QARSP47897 775 aaKnown RBP14.69□□□□□ -0.06
BRCA1-209ENST00000470026 MXI1P50539 228 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 PLTPP55058 493 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 FMO1Q01740 532 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 IFFO1Q0D2I5 559 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 FKBP1CQ5VVH2 108 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 HAUS6Q7Z4H7 955 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 ZSWIM2Q8NEG5 633 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 IL31RAQ8NI17 732 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 CNKSR1Q969H4 720 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SEC16BQ96JE7 1060 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 XPO6Q96QU8 1125 aaKnown RBP14.69□□□□□ -0.06
BRCA1-209ENST00000470026 IWS1Q96ST2 819 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 GMLQ99445 158 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 ACTR5Q9H9F9 607 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-209ENST00000470026 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 ADRB2P07550 413 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 CAP2P40123 477 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SPP2Q13103 211 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 TKFCQ3LXA3 575 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 ZNF568Q3ZCX4 644 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 LACTB2Q53H82 288 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-209ENST00000470026 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SLC13A5Q86YT5 568 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-209ENST00000470026 C4orf19Q8IY42 314 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SLC17A8Q8NDX2 589 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SUPT20HQ8NEM7 779 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 SLCO2A1Q92959 643 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 UVRAGQ9P2Y5 699 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 GTF3C4Q9UKN8 822 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 PNMA2Q9UL42 364 aa14.69□□□□□ -0.06
BRCA1-209ENST00000470026 DDX39AO00148 427 aaKnown RBP14.68□□□□□ -0.06
BRCA1-209ENST00000470026 PYGMP11217 842 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 USP8P40818 1118 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 GPC3P51654 580 aa14.68□□□□□ -0.06
BRCA1-209ENST00000470026 CDR1P51861 262 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms