RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 CHKAP35790 457 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 PPM1KQ8N3J5 372 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 KIF2BQ8N4N8 673 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 THOC1Q96FV9 657 aaKnown RBP13.01□□□□□ -0.33
VARS2-205ENST00000469358 GLT8D2Q9H1C3 349 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 DMAC2Q9NW81 257 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 TBK1Q9UHD2 729 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
VARS2-205ENST00000469358 POLRMTO00411 1230 aaKnown RBP13□□□□□ -0.33
VARS2-205ENST00000469358 PPIP5K2O43314 1243 aa13□□□□□ -0.33
VARS2-205ENST00000469358 RIPK2O43353 540 aa13□□□□□ -0.33
VARS2-205ENST00000469358 NUDT17P0C025 328 aa13□□□□□ -0.33
VARS2-205ENST00000469358 SSTR3P32745 418 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 CIITAP33076 1130 aa13□□□□□ -0.33
VARS2-205ENST00000469358 PEX5P50542 639 aa13□□□□□ -0.33
VARS2-205ENST00000469358 ELF3P78545 371 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
VARS2-205ENST00000469358 MSL1Q68DK7 614 aa13□□□□□ -0.33
VARS2-205ENST00000469358 N4BP2L2Q92802 583 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
VARS2-205ENST00000469358 HERPUD2Q9BSE4 406 aa13□□□□□ -0.33
VARS2-205ENST00000469358 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
VARS2-205ENST00000469358 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
VARS2-205ENST00000469358 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
VARS2-205ENST00000469358 KCNJ2P63252 427 aa13□□□□□ -0.33
VARS2-205ENST00000469358 KIF22Q14807 665 aa13□□□□□ -0.33
VARS2-205ENST00000469358 PLCB4Q15147 1175 aa13□□□□□ -0.33
VARS2-205ENST00000469358 VPS72Q15906 364 aa13□□□□□ -0.33
VARS2-205ENST00000469358 C1orf220Q5T0J3 134 aa13□□□□□ -0.33
VARS2-205ENST00000469358 SP8Q8IXZ3 490 aa13□□□□□ -0.33
VARS2-205ENST00000469358 ZNF577Q9BSK1 485 aa13□□□□□ -0.33
VARS2-205ENST00000469358 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
VARS2-205ENST00000469358 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 TRIM33Q9UPN9 1127 aa13□□□□□ -0.33
VARS2-205ENST00000469358 SRRM3A6NNA2 597 aaPredicted RBP13□□□□□ -0.33
VARS2-205ENST00000469358 CCDC169A6NNP5 214 aa13□□□□□ -0.33
VARS2-205ENST00000469358 RASGRF2O14827 1237 aa13□□□□□ -0.33
VARS2-205ENST00000469358 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.335e-6■■■□□ 18.1
VARS2-205ENST00000469358 EXOC3L1Q86VI1 746 aa13□□□□□ -0.33
VARS2-205ENST00000469358 ADAM33Q9BZ11 813 aa13□□□□□ -0.33
VARS2-205ENST00000469358 CNOT10Q9H9A5 744 aaKnown RBP13□□□□□ -0.33
VARS2-205ENST00000469358 ODF2LQ9ULJ1 636 aa13□□□□□ -0.33
VARS2-205ENST00000469358 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
VARS2-205ENST00000469358 PFASO15067 1338 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 A8MUI8 341 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 FOSP01100 380 aaPredicted RBP12.99□□□□□ -0.33
VARS2-205ENST00000469358 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 CDC25CP30307 473 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 GPC5P78333 572 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 PREPLQ4J6C6 727 aaPredicted RBP12.99□□□□□ -0.33
VARS2-205ENST00000469358 PRCCQ92733 491 aaPredicted RBP12.99□□□□□ -0.33
VARS2-205ENST00000469358 SAAL1Q96ER3 474 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 NUP85Q9BW27 656 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 FAM187AA6NFU0 413 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 TCP11X1B4DZS4 312 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 UBOX5O94941 541 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 SCP2P22307 547 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 ANXA13P27216 316 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 PRELPP51888 382 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 DRP2Q13474 957 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 DHX34Q14147 1143 aaKnown RBP12.99□□□□□ -0.33
VARS2-205ENST00000469358 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 UBL4BQ8N7F7 174 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 GIMAP7Q8NHV1 300 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 DYDC1Q8WWB3 177 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 SEMA4DQ92854 862 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 PGM2Q96G03 612 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 KREMEN1Q96MU8 473 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 KCNK9Q9NPC2 374 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 CHST7Q9NS84 486 aa12.99□□□□□ -0.33
VARS2-205ENST00000469358 O00370 1275 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 TP73O15350 636 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 COILP38432 576 aaPredicted RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 VAMP7P51809 220 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 XRCC4Q13426 336 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 MPP2Q14168 576 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 TMEM179Q6ZVK1 233 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 CDAN1Q8IWY9 1227 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 EPS8L1Q8TE68 723 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
VARS2-205ENST00000469358 NAP1L3Q99457 506 aaPredicted RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 CDC42EP4Q9H3Q1 356 aaKnown RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 MCM8Q9UJA3 840 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 RASAL2Q9UJF2 1139 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 CHRNA3P32297 505 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 CNGA2Q16280 664 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 KYNUQ16719 465 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 SEL1L2Q5TEA6 688 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 PADI6Q6TGC4 694 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 PIGWQ7Z7B1 504 aa12.98□□□□□ -0.33
VARS2-205ENST00000469358 SLC13A5Q86YT5 568 aaPredicted RBP12.98□□□□□ -0.33
VARS2-205ENST00000469358 STAMBPL1Q96FJ0 436 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms