RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 C10orf82Q8WW14 230 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ARHGEF1Q92888 912 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 MPP4Q96JB8 637 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 CORO1BQ9BR76 489 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ZKSCAN3Q9BRR0 538 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 BTBD10Q9BSF8 475 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 GANQ9H2C0 597 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 SH3GLB2Q9NR46 395 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 ZFP69BQ9UJL9 534 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 TNKSO95271 1327 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 RIC1Q4ADV7 1423 aa9.66□□□□□ -0.86
SMARCE1-207ENST00000469334 RGL2O15211 777 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 ASMTLO95671 621 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 SPATA31D3P0C874 917 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 CYP11B2P19099 503 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 MLH1P40692 756 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 EPS15P42566 896 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 RPL21P46778 160 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 NR1H3Q13133 447 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 P3H1Q32P28 736 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 SPATA31D4Q6ZUB0 917 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 ANKRD35Q8N283 1001 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 DGCR14Q96DF8 476 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 ECSITQ9BQ95 431 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 POLR3CQ9BUI4 534 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 CADM1Q9BY67 442 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 UBN1Q9NPG3 1134 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 PIH1D3Q9NQM4 214 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 PICK1Q9NRD5 415 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 ZDHHC7Q9NXF8 308 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 TUBA8Q9NY65 449 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 PHTF1Q9UMS5 762 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 TMEM98Q9Y2Y6 226 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 EDF1O60869 148 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 IDH1O75874 414 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 UQCRFS1P1P0C7P4 283 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 ZCCHC18P0CG32 403 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 TATP17735 454 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 RAB15P59190 212 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 XIAPP98170 497 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 FKBP3Q00688 224 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 PTK2Q05397 1052 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 DCTN2Q13561 401 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 LONRF1Q17RB8 773 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 RFWD3Q6PCD5 774 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 BLIDQ8IZY5 108 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 MIPEPQ99797 713 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 BHMT2Q9H2M3 363 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 STK17AQ9UEE5 414 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 PCDHA3Q9Y5H8 950 aa9.65□□□□□ -0.86
SMARCE1-207ENST00000469334 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.87
SMARCE1-207ENST00000469334 GLI3P10071 1580 aa9.65□□□□□ -0.87
SMARCE1-207ENST00000469334 ADAMTSL3P82987 1691 aa9.65□□□□□ -0.87
SMARCE1-207ENST00000469334 FAM47DPA6NHR8 397 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GSG1L2A8MUP6 293 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 HGSO14964 777 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 LGR5O75473 907 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PLEKHA8P1O95397 391 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 CBX6O95503 412 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GH1P01241 217 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PORP16435 677 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 FOXN2P32314 431 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PLOD1Q02809 727 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PFKFB3Q16875 520 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 HSP90AA5PQ58FG0 334 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 IZUMO2Q6UXV1 221 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 DSTYKQ6XUX3 929 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 OTUD6AQ7L8S5 288 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 ZNF571Q7Z3V5 609 aaPredicted RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GPIHBP1Q8IV16 184 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 KBTBD2Q8IY47 623 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 MCUR1Q96AQ8 359 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 ANKRD2Q9GZV1 360 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 CDC42EP4Q9H3Q1 356 aaKnown RBP9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GOLPH3Q9H4A6 298 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 SLC52A2Q9HAB3 445 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 BTBD7Q9P203 1132 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 STK24Q9Y6E0 443 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 FRMPD4Q14CM0 1322 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GSC2O15499 205 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 AP1G1O43747 822 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 EXOC3O60645 756 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 CDH16O75309 829 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 KRT13P13646 458 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 ETS2P15036 469 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 CTNNA2P26232 953 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 RAP1GDS1P52306 607 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 PDE1BQ01064 536 aa9.64□□□□□ -0.87
SMARCE1-207ENST00000469334 GSTM4Q03013 218 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms