RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 MARCH6O60337 910 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 SLITRK3O94933 977 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 ITGA4P13612 1032 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 NPR3P17342 541 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 NBL1P41271 181 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 AK2P54819 239 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 PTENP60484 403 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 EMC2Q15006 297 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 EARS2Q5JPH6 523 aaKnown RBP13.66□□□□□ -0.22
COL5A1-207ENST00000469093 KIAA0319Q5VV43 1072 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 TPH2Q8IWU9 490 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 RNF168Q8IYW5 571 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-207ENST00000469093 DYDC2Q96IM9 177 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 EIF2AQ9BY44 585 aaKnown RBP13.66□□□□□ -0.22
COL5A1-207ENST00000469093 XPNPEP1Q9NQW7 623 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 PRG3Q9Y2Y8 225 aaPredicted RBP13.66□□□□□ -0.22
COL5A1-207ENST00000469093 HES2Q9Y543 173 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 IPPQ9Y573 584 aa13.66□□□□□ -0.22
COL5A1-207ENST00000469093 CCDC195A0A1B0GUA6 201 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 ARL5CA6NH57 179 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 TEX28O15482 410 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 TSPAN1O60635 241 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 CDKL5O76039 1030 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 ERLIN2O94905 339 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 XBP1P17861 261 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 AXLP30530 894 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 OR1G1P47890 313 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 CYP4A11Q02928 519 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 DSC1Q08554 894 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 MXD4Q14582 209 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-207ENST00000469093 PCBP1Q15365 356 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL5A1-207ENST00000469093 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 POTEDQ86YR6 584 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-207ENST00000469093 FLCNQ8NFG4 579 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
COL5A1-207ENST00000469093 CPB2Q96IY4 423 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 SNX27Q96L92 541 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 MTRQ99707 1265 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
COL5A1-207ENST00000469093 HSD17B14Q9BPX1 270 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 RXFP1Q9HBX9 757 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 TPCN1Q9ULQ1 816 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 SSX2IPQ9Y2D8 614 aa13.65□□□□□ -0.22
COL5A1-207ENST00000469093 USP34Q70CQ2 3546 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 F8W810 466 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 PFKFB2O60825 505 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
COL5A1-207ENST00000469093 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
COL5A1-207ENST00000469093 CTDNEP1O95476 244 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 URODP06132 367 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 ADH1AP07327 375 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 MYBP10242 640 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 MLH1P40692 756 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
COL5A1-207ENST00000469093 AMHR2Q16671 573 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
COL5A1-207ENST00000469093 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 GSTCDQ8NEC7 633 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 CCDC51Q96ER9 411 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 ZFP42Q96MM3 310 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 RHOBTB2Q9BYZ6 727 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 WDR6Q9NNW5 1121 aaKnown RBP13.64□□□□□ -0.23
COL5A1-207ENST00000469093 MAN1C1Q9NR34 630 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 CHST7Q9NS84 486 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 IGSF9Q9P2J2 1179 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 DUSP12Q9UNI6 340 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 STK36Q9NRP7 1315 aa13.64□□□□□ -0.23
COL5A1-207ENST00000469093 SPTBN4Q9H254 2564 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 PRR23AA6NEV1 266 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 INO80B-WBP1J3KQ70 363 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 RFPL2O75678 378 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 LYPLA2O95372 231 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 SPATA31D3P0C874 917 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 ARF4P18085 180 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-207ENST00000469093 AOC1P19801 751 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 ARL2P36404 184 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 GLUD2P49448 558 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 SCNN1GP51170 649 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 DSG1Q02413 1049 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 MBTD1Q05BQ5 628 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 NR5A1Q13285 461 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 TFDP1Q14186 410 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 SPATA31D4Q6ZUB0 917 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 RSAD2Q8WXG1 361 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 EIF2AK1Q9BQI3 630 aaKnown RBP13.63□□□□□ -0.23
COL5A1-207ENST00000469093 COLEC11Q9BWP8 271 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 DPP7Q9UHL4 492 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 GIT1Q9Y2X7 761 aa13.63□□□□□ -0.23
COL5A1-207ENST00000469093 PLXNA3P51805 1871 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms