RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CSRNP2Q9H175 543 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 RRAGDQ9NQL2 400 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-203ENST00000468565 TLR9Q9NR96 1032 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 DNM3Q9UQ16 869 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 MEIS3P2A8K0S8 358 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 OFD1O75665 1012 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 ARF4P18085 180 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-203ENST00000468565 IRS1P35568 1242 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 NAMPTP43490 491 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 HYAL1Q12794 435 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 PPP2R5AQ15172 486 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 FAM187BQ17R55 369 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 NOMO2Q5JPE7 1267 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 AGMOQ6ZNB7 445 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 KIFAP3Q92845 792 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 RSAD1Q9HA92 442 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 UBN1Q9NPG3 1134 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 PRMT7Q9NVM4 692 aaPredicted RBP15.98■□□□□ 0.15
COL27A1-203ENST00000468565 SPG21Q9NZD8 308 aa15.98■□□□□ 0.15
COL27A1-203ENST00000468565 VWA3AA6NCI4 1184 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 KCNA5P22460 613 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 CDC25AP30304 524 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 CTC1Q2NKJ3 1217 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 SLC39A11Q8N1S5 342 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 SMG8Q8ND04 991 aaKnown RBP15.97■□□□□ 0.15
COL27A1-203ENST00000468565 BSNDQ8WZ55 320 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 CPB2Q96IY4 423 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 FZD8Q9H461 694 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 TBC1D13Q9NVG8 400 aa15.97■□□□□ 0.15
COL27A1-203ENST00000468565 PUF60Q9UHX1 559 aaKnown RBP15.97■□□□□ 0.15
COL27A1-203ENST00000468565 E9PMD0 336 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 FSCN2O14926 492 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 SLC26A4O43511 780 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 KRT17Q04695 432 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 LONRF3Q496Y0 759 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 URGCPQ8TCY9 931 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 AK8Q96MA6 479 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 UHRF1Q96T88 793 aaPredicted RBP15.96■□□□□ 0.15
COL27A1-203ENST00000468565 EIF2AQ9BY44 585 aaKnown RBP15.96■□□□□ 0.15
COL27A1-203ENST00000468565 NT5C3AQ9H0P0 336 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 CLDND1Q9NY35 253 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 KANSL3Q9P2N6 904 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 INPP5FQ9Y2H2 1132 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 IPPQ9Y573 584 aa15.96■□□□□ 0.15
COL27A1-203ENST00000468565 A0A1B0GUA9 196 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 B4GALT5O43286 388 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 CSPG5O95196 566 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 ITGA4P13612 1032 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 ALDH7A1P49419 539 aaKnown RBP15.96■□□□□ 0.14
COL27A1-203ENST00000468565 BCAR1P56945 870 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 PUS10Q3MIT2 529 aaKnown RBP15.96■□□□□ 0.14
COL27A1-203ENST00000468565 ADGRD2Q7Z7M1 963 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 IFT74Q96LB3 600 aa15.96■□□□□ 0.14
COL27A1-203ENST00000468565 ZMYM2Q9UBW7 1377 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 ESPNB1AK53 854 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 INPPL1O15357 1258 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 PBX3P40426 434 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 ERVFC1P60507 584 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 MAPK6Q16659 721 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 SLC27A1Q6PCB7 646 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 HACE1Q8IYU2 909 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 DEPTORQ8TB45 409 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 MICAL1Q8TDZ2 1067 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 PNMA5Q96PV4 448 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 TIPINQ9BVW5 301 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 SCAND2PQ9GZW5 306 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-203ENST00000468565 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 NRDE2Q9H7Z3 1164 aa15.95■□□□□ 0.14
COL27A1-203ENST00000468565 ZC3H11AO75152 810 aaKnown RBP eCLIP15.94■□□□□ 0.149e-10■□□□□ 11.2
COL27A1-203ENST00000468565 LTBRP36941 435 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 RNASELQ05823 741 aaKnown RBP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 RINT1Q6NUQ1 792 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 KCNK18Q7Z418 384 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 EFHBQ8N7U6 833 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 TRIM6Q9C030 488 aaPredicted RBP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 NGRNQ9NPE2 291 aaKnown RBP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 TRIP11Q15643 1979 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 TNFRSF10AO00220 468 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 GTF2F1P35269 517 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 EFNA5P52803 228 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 RESTQ13127 1097 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 ADAM15Q13444 863 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 TMEM119Q4V9L6 283 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 C1orf186Q6ZWK4 172 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 TMEM169Q96HH4 297 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 CDK5RAP3Q96JB5 506 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 DRC1Q96MC2 740 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 CDCA3Q99618 268 aaPredicted RBP15.94■□□□□ 0.14
COL27A1-203ENST00000468565 TMEM175Q9BSA9 504 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 IGFLR1Q9H665 355 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 PCDHGC5Q9Y5F6 944 aa15.94■□□□□ 0.14
COL27A1-203ENST00000468565 MUC3AQ02505 3323 aa15.93■□□□□ 0.14
COL27A1-203ENST00000468565 H3BQ06 376 aaPredicted RBP15.93■□□□□ 0.14
COL27A1-203ENST00000468565 ACKR2O00590 384 aa15.93■□□□□ 0.14
COL27A1-203ENST00000468565 N4BP3O15049 544 aa15.93■□□□□ 0.14
COL27A1-203ENST00000468565 NPTXRO95502 500 aa15.93■□□□□ 0.14
COL27A1-203ENST00000468565 PRKCBP05771 671 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms