RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CD276Q5ZPR3 534 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 SWSAP1Q6NVH7 229 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 APOA5Q6Q788 366 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PAQR3Q6TCH7 311 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 LRSAM1Q6UWE0 723 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 MMS22LQ6ZRQ5 1243 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 GAREM2Q75VX8 874 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 TMC6Q7Z403 805 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 FAM129CQ86XR2 697 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 GLB1L2Q8IW92 636 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 STK11IPQ8N1F8 1099 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 C3orf20Q8ND61 904 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 TTLL11Q8NHH1 800 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 RAB24Q969Q5 203 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 APIPQ96GX9 242 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 MYLK2Q9H1R3 596 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 BCAS3Q9H6U6 928 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 AS3MTQ9HBK9 375 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PNPLA8Q9NP80 782 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 DCP1AQ9NPI6 582 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 RBM12Q9NTZ6 932 aaKnown RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 GALNT8Q9NY28 637 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 DTLQ9NZJ0 730 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 FBXO9Q9UK97 447 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 DENND2AQ9ULE3 1009 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PCDHGB3Q9Y5G1 929 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 PCDHGB2Q9Y5G2 931 aa4.48□□□□□ -1.69
HMGB1P25-201ENST00000468402 A0A088AWK7 358 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 FAM171A2A8MVW0 826 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC16A6O15403 523 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 PHGDHO43175 533 aaKnown RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 CYBBP04839 570 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 MPOP05164 745 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 C8AP07357 584 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 DBHP09172 617 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 CD8BP10966 210 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 SYN1P17600 705 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 HOXA10P31260 410 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 GLRBP48167 497 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 GPR15P49685 360 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 ERVFC1P60507 584 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 NKX3-2P78367 333 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 IRX6P78412 446 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 PRR5P85299 388 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 DSC2Q02487 901 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 ICA1Q05084 483 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 NFATC3Q12968 1075 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 NOGQ13253 232 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 SNX17Q15036 470 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 RAB3GAP1Q15042 981 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 VASNQ6EMK4 673 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 GADL1Q6ZQY3 521 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 HEATR3Q7Z4Q2 680 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 ZDHHC13Q8IUH4 622 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 SYTL1Q8IYJ3 562 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 NKAPQ8N5F7 415 aaKnown RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 GPR156Q8NFN8 814 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 SLC35A4Q96G79 324 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 UHRF1Q96T88 793 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 CDC5LQ99459 802 aaKnown RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 VRK1Q99986 396 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 PAGR1Q9BTK6 254 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 ZMAT3Q9HA38 289 aaKnown RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 SARS2Q9NP81 518 aaKnown RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 STARD7Q9NQZ5 370 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 ABCF2Q9UG63 623 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 MAGEL2Q9UJ55 1249 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 PCDHB1Q9Y5F3 818 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 ABCC8Q09428 1581 aa4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 BAZ1AQ9NRL2 1556 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P25-201ENST00000468402 A0A0A6YYJ9 748 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 NOTOA8MTQ0 251 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 FOXN3O00409 490 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PRAMEF4O60810 478 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 LRG1P02750 347 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PNLIPP16233 465 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 RPL17P18621 184 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 IL6STP40189 918 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 WASP42768 502 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 GRK6P43250 576 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 CASP5P51878 434 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF543Q08ER8 600 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 MAP3K12Q12852 859 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PUM3Q15397 648 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 TUBB8Q3ZCM7 444 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 KHDC1Q4VXA5 237 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PRR16Q569H4 304 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 DGKKQ5KSL6 1271 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 TEPPQ6URK8 271 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 CLEC4GQ6UXB4 293 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 TMC5Q6UXY8 1006 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 CD300LDQ6UXZ3 194 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 LDHAL6AQ6ZMR3 332 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 CLASRPQ8N2M8 674 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 TXLNBQ8N3L3 684 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 MSL3Q8N5Y2 521 aaKnown RBP4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 ZNF527Q8NB42 609 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
HMGB1P25-201ENST00000468402 PLBD2Q8NHP8 589 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms