RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 STAMQ92783 540 aa16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 TYW1Q9NV66 732 aaKnown RBP16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 USP25Q9UHP3 1055 aa16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 SERTAD1Q9UHV2 236 aa16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 TDRD15B5MCY1 1934 aaKnown RBP16.31■□□□□ 0.2
PCOLCE-204ENST00000468214 MYMKA6NI61 221 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 ACTN4O43707 911 aaKnown RBP16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 FAM13AO94988 1023 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 LAG3P18627 525 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 NAMPTP43490 491 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 RAB27AP51159 221 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 DMP1Q13316 513 aaPredicted RBP16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 GIT2Q14161 759 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 DYMQ7RTS9 669 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 COLGALT1Q8NBJ5 622 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 ADAMTS19Q8TE59 1207 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 DDX12PQ92771 950 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 CASD1Q96PB1 797 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 ZHX3Q9H4I2 956 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 MINDY3Q9H8M7 445 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 AGPAT5Q9NUQ2 364 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 FAM105AQ9NUU6 356 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 KBTBD4Q9NVX7 518 aa16.3■□□□□ 0.2
PCOLCE-204ENST00000468214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 CCDC169A6NNP5 214 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 SFI1A8K8P3 1242 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 INO80B-WBP1J3KQ70 363 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 GADD45BO75293 160 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 SLFN14P0C7P3 912 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 ATF7P17544 494 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 KCNA5P22460 613 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 PEX3P56589 373 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 PTENP60484 403 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 AMPD3Q01432 767 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 LONRF3Q496Y0 759 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 CLLU1OSQ5K130 101 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 ZNF598Q86UK7 904 aaKnown RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 ZBTB8OSQ8IWT0 167 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 DEPTORQ8TB45 409 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 SPPL3Q8TCT6 385 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 HELQQ8TDG4 1101 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 UHRF1Q96T88 793 aaPredicted RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 MRPL9Q9BYD2 267 aaKnown RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 C17orf75Q9HAS0 396 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 PDCD11Q14690 1871 aaKnown RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 SPTBN5Q9NRC6 3674 aaKnown RBP16.29■□□□□ 0.2
PCOLCE-204ENST00000468214 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 FGF18O76093 207 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 ZNF202O95125 648 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 PLS3P13797 630 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 AFMP43652 599 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 ZNF131P52739 623 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 NCBP1Q09161 790 aaKnown RBP16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 CDCA2Q69YH5 1023 aaPredicted RBP16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 GLB1LQ6UWU2 654 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 IFNLR1Q8IU57 520 aaPredicted RBP16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 LPPQ93052 612 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 ZNF558Q96NG5 402 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 KIFC3Q9BVG8 833 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 NFKBIZQ9BYH8 718 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 CWH43Q9H720 699 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 LARSQ9P2J5 1176 aaKnown RBP16.28■□□□□ 0.2
PCOLCE-204ENST00000468214 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 REV3LO60673 3130 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 NCK2O43639 380 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 BMP1P13497 986 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 IDEP14735 1019 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 DNAJB1P25685 340 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 PPM1AP35813 382 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 NPTX2P47972 431 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 UBE2HP62256 183 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 ASIC1P78348 528 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 UBE3AQ05086 875 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 MBTD1Q05BQ5 628 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 PCBP1Q15365 356 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 FMR1NBQ8N0W7 255 aaPredicted RBP16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 MYCT1Q8N699 235 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 CNNM3Q8NE01 707 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 MICAL1Q8TDZ2 1067 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 DNAJC19Q96DA6 116 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 PGBD4Q96DM1 585 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 PABPC5Q96DU9 382 aaKnown RBP16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 TRIM9Q9C026 710 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 IGFLR1Q9H665 355 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 KMT5AQ9NQR1 393 aa16.27■□□□□ 0.2
PCOLCE-204ENST00000468214 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms