RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ALDH2P05091 517 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 ARF4P18085 180 aaPredicted RBP27.21■■□□□ 1.95
PTCH1-210ENST00000468211 AXLP30530 894 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 PTPN21Q16825 1174 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 NOTUMQ6P988 496 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 CDR2LQ86X02 465 aaPredicted RBP27.21■■□□□ 1.95
PTCH1-210ENST00000468211 CNNM3Q8NE01 707 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 PBXIP1Q96AQ6 731 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 FAM193BQ96PV7 902 aaPredicted RBP27.21■■□□□ 1.95
PTCH1-210ENST00000468211 CSRNP2Q9H175 543 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 MARCH5Q9NX47 278 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 LIMCH1Q9UPQ0 1083 aa27.21■■□□□ 1.95
PTCH1-210ENST00000468211 ARL5CA6NH57 179 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 C2CD4DB7Z1M9 353 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 INPPL1O15357 1258 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 USO1O60763 962 aaKnown RBP27.2■■□□□ 1.94
PTCH1-210ENST00000468211 LILRB3O75022 631 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 MED24O75448 989 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 MLH1P40692 756 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 GIT2Q14161 759 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 PCBP1Q15365 356 aaKnown RBP eCLIP27.2■■□□□ 1.94
PTCH1-210ENST00000468211 MAEAQ7L5Y9 396 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 CATSPER3Q86XQ3 398 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 COLGALT2Q8IYK4 626 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 TMEM87AQ8NBN3 555 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 ZFP42Q96MM3 310 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 KLHL5Q96PQ7 755 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 PRG3Q9Y2Y8 225 aaPredicted RBP27.2■■□□□ 1.94
PTCH1-210ENST00000468211 PIEZO1Q92508 2521 aa27.2■■□□□ 1.94
PTCH1-210ENST00000468211 F8W810 466 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 SIGLEC14Q08ET2 396 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 TAS1R1Q7RTX1 841 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 CCDC51Q96ER9 411 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 ASIC4Q96FT7 647 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 CCDC43Q96MW1 224 aaKnown RBP27.19■■□□□ 1.94
PTCH1-210ENST00000468211 APOL6Q9BWW8 343 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 NXF3Q9H4D5 531 aaKnown RBP27.19■■□□□ 1.94
PTCH1-210ENST00000468211 UBN1Q9NPG3 1134 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 DZANK1Q9NVP4 752 aa27.19■■□□□ 1.94
PTCH1-210ENST00000468211 CNPP09543 421 aaKnown RBP27.18■■□□□ 1.94
PTCH1-210ENST00000468211 XRCC6P12956 609 aaKnown RBP eCLIP27.18■■□□□ 1.94
PTCH1-210ENST00000468211 SCNN1GP51170 649 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 NHLH1Q02575 133 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 DSC1Q08554 894 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 ZNF174Q15697 407 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 C8orf76Q96K31 380 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 NECTIN4Q96NY8 510 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 NFKBIZQ9BYH8 718 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 NR2E1Q9Y466 385 aa27.18■■□□□ 1.94
PTCH1-210ENST00000468211 EFEMP2O95967 443 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 MTHFRP42898 656 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 OR1G1P47890 313 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 SAFBQ15424 915 aaKnown RBP eCLIP27.17■■□□□ 1.94
PTCH1-210ENST00000468211 IER5LQ5T953 404 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 KIAA1841Q6NSI8 718 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 TMC5Q6UXY8 1006 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 GSTCDQ8NEC7 633 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 KIF2CQ99661 725 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 KCNH6Q9H252 994 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 TUFT1Q9NNX1 390 aa27.17■■□□□ 1.94
PTCH1-210ENST00000468211 C2CD2LO14523 706 aa27.16■■□□□ 1.94
PTCH1-210ENST00000468211 AKAP5P24588 427 aa27.16■■□□□ 1.94
PTCH1-210ENST00000468211 CLCN4P51793 760 aa27.16■■□□□ 1.94
PTCH1-210ENST00000468211 NCBP1Q09161 790 aaKnown RBP27.16■■□□□ 1.94
PTCH1-210ENST00000468211 POTEGQ6S5H5 508 aa27.16■■□□□ 1.94
PTCH1-210ENST00000468211 RIPOR3Q96MK2 946 aa27.16■■□□□ 1.94
PTCH1-210ENST00000468211 TTLL13PA6NNM8 815 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 EIF5BO60841 1220 aaKnown RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 NPTXRO95502 500 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 SOD2P04179 222 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 KLRC2P26717 231 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 CABP7Q86V35 215 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 ALYREFQ86V81 257 aaKnown RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 RNF168Q8IYW5 571 aaPredicted RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 FBXL6Q8N531 539 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 BSNDQ8WZ55 320 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 LLPHQ9BRT6 129 aaKnown RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 POLR3CQ9BUI4 534 aaPredicted RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 HERC2P3Q9BVR0 1158 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 SMOC2Q9H3U7 446 aa27.15■■□□□ 1.94
PTCH1-210ENST00000468211 MRPL17Q9NRX2 175 aaKnown RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 DBR1Q9UK59 544 aaKnown RBP27.15■■□□□ 1.94
PTCH1-210ENST00000468211 A0A1B0GUA9 196 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 LRRIQ4A6NIV6 560 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 OR52Z1P0C646 297 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 ATAT1Q5SQI0 421 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 ZBTB33Q86T24 672 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 PPFIBP1Q86W92 1011 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 KREMEN2Q8NCW0 462 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 PRSS33Q8NF86 280 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 FBXO18Q8NFZ0 1043 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 EMILIN2Q9BXX0 1053 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 TRIM6Q9C030 488 aaPredicted RBP27.14■■□□□ 1.94
PTCH1-210ENST00000468211 FOXP1Q9H334 677 aaPredicted RBP27.14■■□□□ 1.94
PTCH1-210ENST00000468211 KLK14Q9P0G3 267 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 GIT1Q9Y2X7 761 aa27.14■■□□□ 1.94
PTCH1-210ENST00000468211 PDGFBP01127 241 aaPredicted RBP27.13■■□□□ 1.93
PTCH1-210ENST00000468211 NBR1Q14596 966 aa27.13■■□□□ 1.93
PTCH1-210ENST00000468211 SLC27A1Q6PCB7 646 aa27.13■■□□□ 1.93
PTCH1-210ENST00000468211 NACC1Q96RE7 527 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms