RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 CEP72Q9P209 647 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 DUSP11O75319 330 aaKnown RBP22.41■■□□□ 1.18
TMEM53-207ENST00000468117 VTNP04004 478 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 SMIM10L2AP0DMW4 78 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 SMIM10L2BP0DMW5 78 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 TMOD1P28289 359 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 MAPK6Q16659 721 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 DPY19L2P1Q6NXN4 242 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 RRAGAQ7L523 313 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 CD99L2Q8TCZ2 262 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 LMBR1Q8WVP7 490 aa22.41■■□□□ 1.18
TMEM53-207ENST00000468117 LRRC53A6NM62 1247 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 PRKCBP05771 671 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 ELNP15502 786 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MATR3P43243 847 aaKnown RBP eCLIP22.4■■□□□ 1.18
TMEM53-207ENST00000468117 PTENP60484 403 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 PPP3CAQ08209 521 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MFSD10Q14728 455 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 CCDC127Q96BQ5 260 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 DESI2Q9BSY9 194 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 EDEM3Q9BZQ6 932 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 GANQ9H2C0 597 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MINDY3Q9H8M7 445 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 KCND1Q9NSA2 647 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 AGO2Q9UKV8 859 aaKnown RBP22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MYADML2A6NDP7 307 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 INO80B-WBP1J3KQ70 363 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 C6orf222P0C671 652 aaPredicted RBP22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MYL7Q01449 175 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 CACNB2Q08289 660 aaPredicted RBP22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MEA1Q16626 185 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 SLFN12LQ6IEE8 588 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 MRPL4Q9BYD3 311 aaKnown RBP22.4■■□□□ 1.18
TMEM53-207ENST00000468117 INO80BQ9C086 356 aaPredicted RBP22.4■■□□□ 1.18
TMEM53-207ENST00000468117 IFT122Q9HBG6 1241 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 PLCB1Q9NQ66 1216 aa22.4■■□□□ 1.18
TMEM53-207ENST00000468117 GCLMP48507 274 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 PSEN2P49810 448 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 ZPBP2Q6X784 338 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 GPIHBP1Q8IV16 184 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 PARD3BQ8TEW8 1205 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 MFSD14AQ96MC6 490 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 MSTO1Q9BUK6 570 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 ZNHIT6Q9NWK9 470 aaKnown RBP22.39■■□□□ 1.17
TMEM53-207ENST00000468117 PLAGL2Q9UPG8 496 aa22.39■■□□□ 1.17
TMEM53-207ENST00000468117 A0A087WZ62 844 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 A0A0B4J269 797 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 RRN3P2A6NIE6 340 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 EXTL3O43909 919 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 ACOT2P49753 483 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 NLRP11P59045 1033 aaKnown RBP22.38■■□□□ 1.17
TMEM53-207ENST00000468117 MBTD1Q05BQ5 628 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 CYP24A1Q07973 514 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 KLHDC7AQ5VTJ3 777 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 NFRKBQ6P4R8 1299 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 TRIM65Q6PJ69 517 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 PPP1R13BQ96KQ4 1090 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 C16orf45Q96MC5 204 aaPredicted RBP22.38■■□□□ 1.17
TMEM53-207ENST00000468117 POP1Q99575 1024 aaKnown RBP22.38■■□□□ 1.17
TMEM53-207ENST00000468117 FDXACB1Q9BRP7 624 aaPredicted RBP22.38■■□□□ 1.17
TMEM53-207ENST00000468117 SIX2Q9NPC8 291 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 NRCAMQ92823 1304 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 ZNF233A6NK53 670 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 HAS3O00219 553 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 CSDE1O75534 798 aaKnown RBP22.38■■□□□ 1.17
TMEM53-207ENST00000468117 IQCF3P0C7M6 154 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 UCHL3P15374 230 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 PDXDC1Q6P996 788 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 KIAA0319LQ8IZA0 1049 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 MAP7D2Q96T17 732 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 ACO2Q99798 780 aaKnown RBP22.38■■□□□ 1.17
TMEM53-207ENST00000468117 FZD8Q9H461 694 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 SRRDQ9UH36 339 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 PPP2R2CQ9Y2T4 447 aa22.38■■□□□ 1.17
TMEM53-207ENST00000468117 LRRIQ3A6PVS8 624 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-207ENST00000468117 CLDN3O15551 220 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 SEPT4O43236 478 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 PGK1P00558 417 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 HARSP12081 509 aaKnown RBP22.37■■□□□ 1.17
TMEM53-207ENST00000468117 HNRNPH3P31942 346 aaKnown RBP22.37■■□□□ 1.17
TMEM53-207ENST00000468117 PHKA2P46019 1235 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 MCCD1P59942 119 aaPredicted RBP22.37■■□□□ 1.17
TMEM53-207ENST00000468117 PURAQ00577 322 aaKnown RBP22.37■■□□□ 1.17
TMEM53-207ENST00000468117 HIC1Q14526 733 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 ZBTB41Q5SVQ8 909 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 NFKBIZQ9BYH8 718 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 KIAA1586Q9HCI6 787 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 FHOD1Q9Y613 1164 aa22.37■■□□□ 1.17
TMEM53-207ENST00000468117 ACKR2O00590 384 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 KIAA0391O15091 583 aaKnown RBP22.36■■□□□ 1.17
TMEM53-207ENST00000468117 B4GALT5O43286 388 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 TOM1L1O75674 476 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 PRKAR2AP13861 404 aaKnown RBP22.36■■□□□ 1.17
TMEM53-207ENST00000468117 GJA9P57773 515 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 GNASQ5JWF2 1037 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 CRELD2Q6UXH1 353 aaPredicted RBP22.36■■□□□ 1.17
TMEM53-207ENST00000468117 ZBTB33Q86T24 672 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 TCHPQ9BT92 498 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 TMEM117Q9H0C3 514 aa22.36■■□□□ 1.17
TMEM53-207ENST00000468117 GPR25O00155 361 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms