RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PSMA7O14818 248 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 EDN1P05305 212 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 BMP6P22004 513 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 PRCPP42785 496 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 NLRP12P59046 1061 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 DSC3Q14574 896 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 SLFN12LQ6IEE8 588 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 SLC27A1Q6PCB7 646 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 MPZL3Q6UWV2 235 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 ADSSL1Q8N142 457 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 VWCEQ96DN2 955 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 ADAM2Q99965 735 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 TCHPQ9BT92 498 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 TRAIPQ9BWF2 469 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 PDZD7Q9H5P4 517 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 C1orf112Q9NSG2 853 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 CGNQ9P2M7 1197 aaKnown RBP16.66■□□□□ 0.26
SNIP1-202ENST00000468040 DACH1Q9UI36 760 aa16.66■□□□□ 0.26
SNIP1-202ENST00000468040 ZMYM2Q9UBW7 1377 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 CLDN3O15551 220 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 FGBP02675 491 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 ACRP10323 421 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 SKIP12755 728 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 PROZP22891 400 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 HOXD13P35453 343 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
SNIP1-202ENST00000468040 RAB27AP51159 221 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 DCAF4L1Q3SXM0 396 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 ZNF568Q3ZCX4 644 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 DHTKD1Q96HY7 919 aaPredicted RBP16.65■□□□□ 0.26
SNIP1-202ENST00000468040 TRIM6Q9C030 488 aaPredicted RBP16.65■□□□□ 0.26
SNIP1-202ENST00000468040 TSPYL2Q9H2G4 693 aaPredicted RBP16.65■□□□□ 0.26
SNIP1-202ENST00000468040 PTPRHQ9HD43 1115 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 RGS18Q9NS28 235 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 TYW1Q9NV66 732 aaKnown RBP16.65■□□□□ 0.26
SNIP1-202ENST00000468040 RNF216Q9NWF9 866 aaPredicted RBP16.65■□□□□ 0.26
SNIP1-202ENST00000468040 ANKFY1Q9P2R3 1169 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 USP20Q9Y2K6 914 aa16.65■□□□□ 0.26
SNIP1-202ENST00000468040 H0YGN5 161 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 MGEA5O60502 916 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 MCF2P10911 925 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNIP1-202ENST00000468040 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
SNIP1-202ENST00000468040 STX1AQ16623 288 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 SLC24A5Q71RS6 500 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 MTIF3Q9H2K0 278 aaKnown RBP16.64■□□□□ 0.25
SNIP1-202ENST00000468040 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 FAM105AQ9NUU6 356 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 ANO10Q9NW15 660 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 STYXL1Q9Y6J8 313 aa16.64■□□□□ 0.25
SNIP1-202ENST00000468040 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 A0A0U1RQF3 1178 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 PPP1R3GB7ZBB8 358 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 ANKRD63C9JTQ0 380 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 PDXKO00764 312 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 KIAA0391O15091 583 aaKnown RBP16.63■□□□□ 0.25
SNIP1-202ENST00000468040 TGFB1I1O43294 461 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 CALUO43852 315 aaPredicted RBP16.63■□□□□ 0.25
SNIP1-202ENST00000468040 CCDC192P0DO97 292 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 GARTP22102 1010 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 EPHB4P54760 987 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 MCL1Q07820 350 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 HSP90AA2PQ14568 343 aaPredicted RBP16.63■□□□□ 0.25
SNIP1-202ENST00000468040 TCTN1Q2MV58 587 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 DPCR1Q3MIW9 517 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 CT47A1Q5JQC4 288 aaPredicted RBP16.63■□□□□ 0.25
SNIP1-202ENST00000468040 TMEM240Q5SV17 173 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 EEF1DP3Q658K8 133 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 ARMCX5Q6P1M9 558 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 SLC39A4Q6P5W5 647 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 C16orf59Q7L2K0 433 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
SNIP1-202ENST00000468040 HACE1Q8IYU2 909 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 LINC01599Q8WXQ3 324 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 POMGNT1Q8WZA1 660 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 TSG101Q99816 390 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 CDT1Q9H211 546 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 AGPAT3Q9NRZ7 376 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 TRAF3IP3Q9Y228 551 aa16.63■□□□□ 0.25
SNIP1-202ENST00000468040 A0A0B4J269 797 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 SYCE3A1L190 88 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 C9IYK1 514 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 ENPP3O14638 875 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 ABLIM1O14639 778 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 ZNF623O75123 536 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 NPTXRO95502 500 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
SNIP1-202ENST00000468040 LRRC63Q05C16 580 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 TYRO3Q06418 890 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 PAK1Q13153 545 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 KYAT1Q16773 422 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 CENPPQ6IPU0 288 aa16.62■□□□□ 0.25
SNIP1-202ENST00000468040 KLHL10Q6JEL2 608 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms