RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 IFT74Q96LB3 600 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 DRC1Q96MC2 740 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PLIN2Q99541 437 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PDZD7Q9H5P4 517 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 TMEM134Q9H6X4 195 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 UBN1Q9NPG3 1134 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 TLR9Q9NR96 1032 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 HES2Q9Y543 173 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 TCHHQ07283 1943 aa16.74■□□□□ 0.27
ATG4B-215ENST00000468018 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 NCK2O43639 380 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 GALTP07902 379 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 ITGA4P13612 1032 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 KCNQ1P51787 676 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 BCAR1P56945 870 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 ERVFC1P60507 584 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 KARSQ15046 597 aaKnown RBP16.73■□□□□ 0.27
ATG4B-215ENST00000468018 LEXMQ3ZCV2 418 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 PDE12Q6L8Q7 609 aaKnown RBP16.73■□□□□ 0.27
ATG4B-215ENST00000468018 TMEM173Q86WV6 379 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-215ENST00000468018 CDR2LQ86X02 465 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-215ENST00000468018 DEPTORQ8TB45 409 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 SPG21Q9NZD8 308 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
ATG4B-215ENST00000468018 DLL1O00548 723 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 N4BP3O15049 544 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 DDHD2O94830 711 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 NPTXRO95502 500 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 PLCG1P19174 1290 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 MARCKSP29966 332 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-215ENST00000468018 PEX3P56589 373 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 DSC1Q08554 894 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 DMP1Q13316 513 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-215ENST00000468018 PRPF4BQ13523 1007 aaKnown RBP16.72■□□□□ 0.27
ATG4B-215ENST00000468018 ZRSR1Q15695 479 aaKnown RBP16.72■□□□□ 0.27
ATG4B-215ENST00000468018 NT5DC1Q5TFE4 455 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 ZNF280BQ86YH2 543 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 SYMPKQ92797 1274 aaKnown RBP16.72■□□□□ 0.27
ATG4B-215ENST00000468018 GAD1Q99259 594 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 TMEM175Q9BSA9 504 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 PTPRHQ9HD43 1115 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 MIOSQ9NXC5 875 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 DNAJB4Q9UDY4 337 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 INPP5FQ9Y2H2 1132 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
ATG4B-215ENST00000468018 ARL5CA6NH57 179 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 NT5C1B-RDH14C9J2C7 533 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 ZC3H11AO75152 810 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATG4B-215ENST00000468018 EFEMP2O95967 443 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 PLS3P13797 630 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.272e-8■■■■■ 34.1
ATG4B-215ENST00000468018 MLH1P40692 756 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 ALDH7A1P49419 539 aaKnown RBP16.71■□□□□ 0.27
ATG4B-215ENST00000468018 ZNF131P52739 623 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 KCNC3Q14003 757 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 EEF1DP3Q658K8 133 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 COLGALT2Q8IYK4 626 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-215ENST00000468018 URGCPQ8TCY9 931 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 BCL7CQ8WUZ0 217 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-215ENST00000468018 RAD54LQ92698 747 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 IGSF21Q96ID5 467 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 EPSTI1Q96J88 318 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 CLIC6Q96NY7 704 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 ODF2LQ9ULJ1 636 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 USP20Q9Y2K6 914 aa16.71■□□□□ 0.27
ATG4B-215ENST00000468018 RBM19Q9Y4C8 960 aaKnown RBP16.71■□□□□ 0.27
ATG4B-215ENST00000468018 SFI1A8K8P3 1242 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 K7ERI5 159 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 ABLIM1O14639 778 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 TBX10O75333 385 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 PROZP22891 400 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 SLC11A1P49279 550 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 DLX2Q07687 328 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-215ENST00000468018 ADAM15Q13444 863 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 SPECC1Q5M775 1068 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 EFHBQ8N7U6 833 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 TMEM161BQ8NDZ6 487 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
ATG4B-215ENST00000468018 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 VN1R3Q9BXE9 311 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-215ENST00000468018 ZBP1Q9H171 429 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 NGRNQ9NPE2 291 aaKnown RBP16.7■□□□□ 0.26
ATG4B-215ENST00000468018 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 PUF60Q9UHX1 559 aaKnown RBP16.7■□□□□ 0.26
ATG4B-215ENST00000468018 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 IRAK3Q9Y616 596 aa16.7■□□□□ 0.26
ATG4B-215ENST00000468018 VWA8A3KMH1 1905 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 NPHP3-ACAD11A0A0J9YXS1 232 aa16.69■□□□□ 0.26
ATG4B-215ENST00000468018 CCDC169A6NNP5 214 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms