RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 INO80B-WBP1J3KQ70 363 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 KLK7P49862 253 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 PPP2R3AQ06190 1150 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 TMEM62Q0P6H9 643 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 KCNMA1Q12791 1236 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 KCNH2Q12809 1159 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 KIZQ2M2Z5 673 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 DPY19L2P1Q6NXN4 242 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 TSHZ1Q6ZSZ6 1077 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 CCDC186Q7Z3E2 898 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 SRGAP1Q7Z6B7 1085 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 SERINC5Q86VE9 423 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 GPD1LQ8N335 351 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 CCDC155Q8N6L0 562 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 SLC43A3Q8NBI5 491 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 RDH13Q8NBN7 331 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 NLRP7Q8WX94 980 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 MFSD14AQ96MC6 490 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 INO80BQ9C086 356 aaPredicted RBP14.19□□□□□ -0.14
COL4A1-202ENST00000467182 PHF24Q9UPV7 400 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 SIK3Q9Y2K2 1263 aa14.19□□□□□ -0.14
COL4A1-202ENST00000467182 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL4A1-202ENST00000467182 CENPFP49454 3210 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 A0A1W2PQ45 241 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 A0A1W2PQY0 241 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 KIAA0391O15091 583 aaKnown RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 EXTL3O43909 919 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 CSDE1O75534 798 aaKnown RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 TOM1L1O75674 476 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 CCL5P13501 91 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 DLG4P78352 724 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 CDC42EP1Q00587 391 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 PTPN11Q06124 597 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 MCL1Q07820 350 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 BFSP1Q12934 665 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 ITGA7Q13683 1181 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 SNRNP35Q16560 246 aaKnown RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 SLC9C1Q4G0N8 1177 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 ZBTB41Q5SVQ8 909 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 EEF1DP3Q658K8 133 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 SLFN12LQ6IEE8 588 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 TAF2Q6P1X5 1199 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 CTU1Q7Z7A3 348 aaKnown RBP14.18□□□□□ -0.14
COL4A1-202ENST00000467182 RPAINQ86UA6 219 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 NME8Q8N427 588 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 PRIMPOLQ96LW4 560 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 TTYH3Q9C0H2 523 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 OGDHLQ9ULD0 1010 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 TNFSF13BQ9Y275 285 aa14.18□□□□□ -0.14
COL4A1-202ENST00000467182 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 RNF225M0QZC1 329 aaPredicted RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 TSPAN1O60635 241 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 AFPP02771 609 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 TPM2P07951 284 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 DARSP14868 501 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 WNT7BP56706 349 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 ENPEPQ07075 957 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 CYP24A1Q07973 514 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 MGAT3Q09327 533 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 SYCP1Q15431 976 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 TRIM71Q2Q1W2 868 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 HS1BP3Q53T59 392 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 FKBP15Q5T1M5 1219 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 ATF7IP2Q5U623 682 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 INTS8Q75QN2 995 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 ARRDC4Q8NCT1 418 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 TMEM40Q8WWA1 233 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 DHX38Q92620 1227 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 OSMRQ99650 979 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 PDZD7Q9H5P4 517 aa14.17□□□□□ -0.14
COL4A1-202ENST00000467182 AGO2Q9UKV8 859 aaKnown RBP14.17□□□□□ -0.14
COL4A1-202ENST00000467182 ANK1P16157 1881 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 GOLGA6L6A8MZA4 724 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 GYPCP04921 128 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 ARF4P18085 180 aaPredicted RBP14.16□□□□□ -0.14
COL4A1-202ENST00000467182 FGFR4P22455 802 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 VAMP7P51809 220 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 RBL2Q08999 1139 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 GOLGA8FQ08AF8 430 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 GOLGA8DPQ0D2H9 430 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 SNX17Q15036 470 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 DCAF17Q5H9S7 520 aaPredicted RBP14.16□□□□□ -0.14
COL4A1-202ENST00000467182 FAM47CQ5HY64 1035 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 MPZL3Q6UWV2 235 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 CACTINQ8WUQ7 758 aaKnown RBP14.16□□□□□ -0.14
COL4A1-202ENST00000467182 GLT1D1Q96MS3 346 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 FAM213AQ9BRX8 229 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 MSTO1Q9BUK6 570 aa14.16□□□□□ -0.14
COL4A1-202ENST00000467182 GCOM2Q9BZD3 368 aaPredicted RBP14.16□□□□□ -0.14
COL4A1-202ENST00000467182 CDT1Q9H211 546 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms