RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■■■■□ 25.2
SNAPC3-205ENST00000467062 SCN9AQ15858 1988 aa19.42■□□□□ 0.7
SNAPC3-205ENST00000467062 PALMO75781 387 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 SREBF1P36956 1147 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 LMNB2Q03252 620 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 KLHL30Q0D2K2 578 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 BNIP1Q12981 228 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 USP4Q13107 963 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 KNOP1Q1ED39 458 aaKnown RBP19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 ATXN2LQ8WWM7 1075 aaKnown RBP19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 PBKQ96KB5 322 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 CEP63Q96MT8 703 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 TRAPPC9Q96Q05 1148 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 CCDC134Q9H6E4 229 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 SERPINA10Q9UK55 444 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 TMEM154Q6P9G4 183 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 SYT15Q9BQS2 421 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 WDR18Q9BV38 432 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 TMEM59LQ9UK28 342 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 VAV3Q9UKW4 847 aa19.41■□□□□ 0.7
SNAPC3-205ENST00000467062 SERPING1P05155 500 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 NMT1P30419 496 aaKnown RBP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 POLE2P56282 527 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 Q4G0T1 1027 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 RAB3IPQ96QF0 476 aaPredicted RBP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 SELENOSQ9BQE4 189 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 GLT8D2Q9H1C3 349 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 FBXO28Q9NVF7 368 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 PKD2L1Q9P0L9 805 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 CTNNAL1Q9UBT7 734 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 PNMA2Q9UL42 364 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 A0A1B0GVG6 124 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 FAM163BP0C2L3 166 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 MYBL1P10243 752 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 GNAZP19086 355 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 PTK2Q05397 1052 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 GMCL1P1Q8NEA9 526 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 GMCL1Q96IK5 515 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 NAP1L4Q99733 375 aaKnown RBP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 ZCWPW1Q9H0M4 648 aa19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 LUC7LQ9NQ29 371 aaKnown RBP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 ARMCX3Q9UH62 379 aaPredicted RBP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 AJAP1Q9UKB5 411 aaPredicted RBP19.4■□□□□ 0.7
SNAPC3-205ENST00000467062 F8VZ95 297 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 TUBP50607 506 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 PDE6CP51160 858 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 COG2Q14746 738 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 SPDYCQ5MJ68 293 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 MIPOL1Q8TD10 442 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 MAIP1Q8WWC4 291 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 TAF4BQ92750 862 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 KIFAP3Q92845 792 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 GLIS2Q9BZE0 524 aaPredicted RBP19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 INTS9Q9NV88 658 aaKnown RBP19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 BCS1LQ9Y276 419 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 PCDHGA4Q9Y5G9 962 aa19.39■□□□□ 0.7
SNAPC3-205ENST00000467062 SSU72P8A0A1W2PR75 194 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 CES2O00748 559 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 PDHA1P08559 390 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 SP100P23497 879 aaPredicted RBP19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 MMP13P45452 471 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 SF3A3Q12874 501 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 TSNAXIP1Q2TAA8 658 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 MAEAQ7L5Y9 396 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 TMC3Q7Z5M5 1100 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 KIF2BQ8N4N8 673 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 DYDC2Q96IM9 177 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 PCMTD2Q9NV79 361 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 RABGAP1Q9Y3P9 1069 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 USP15Q9Y4E8 981 aaPredicted RBP19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 SNX3O60493 162 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 PLS1Q14651 629 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 MEI1Q5TIA1 1274 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 FGD4Q96M96 766 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 PDGFDQ9GZP0 370 aaPredicted RBP19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 GANQ9H2C0 597 aa19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 WRAP73Q9P2S5 460 aaPredicted RBP19.39■□□□□ 0.69
SNAPC3-205ENST00000467062 BHMG1C9JSJ3 638 aaPredicted RBP19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 DDX39AO00148 427 aaKnown RBP19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 SUN1O94901 812 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 GNA14O95837 355 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 ACADSP16219 412 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 STAT2P52630 851 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 ASRGL1Q7L266 308 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 DDX42Q86XP3 938 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 RBM46Q8TBY0 533 aaKnown RBP19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 SH2D3AQ9BRG2 576 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 TRIM7Q9C029 511 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 PITPNM2Q9BZ72 1349 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 ARFGEF1Q9Y6D6 1849 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 IGLV3-22A0A075B6J6 115 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 SLITRK3O94933 977 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 UCHL3P15374 230 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 CALB2P22676 271 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 PON1P27169 355 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 SLC18A3Q16572 532 aa19.38■□□□□ 0.69
SNAPC3-205ENST00000467062 CC2D2BQ6DHV5 1058 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms