RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 CACTIN-AS1Q8N1I8 211 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 DEPTORQ8TB45 409 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 ERP27Q96DN0 273 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 NGLY1Q96IV0 654 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 SNX27Q96L92 541 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 TGS1Q96RS0 853 aaKnown RBP11.84□□□□□ -0.51
SFXN3-204ENST00000466982 TSG101Q99816 390 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 CARD9Q9H257 536 aa11.84□□□□□ -0.51
SFXN3-204ENST00000466982 ARPP21Q9UBL0 812 aaPredicted RBP11.84□□□□□ -0.51
SFXN3-204ENST00000466982 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.51
SFXN3-204ENST00000466982 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 PFASO15067 1338 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 O00370 1275 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 CYTH3O43739 400 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 ACSL3O95573 720 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 PDGFRBP09619 1106 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 CD97P48960 835 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 ZCWPW2Q504Y3 356 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 SPDYCQ5MJ68 293 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 MEX3CQ5U5Q3 659 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 LRRC43Q8N309 656 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 U2AF1L4Q8WU68 220 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 LARP4BQ92615 738 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 CENPOQ9BU64 300 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 KIAA1683Q9H0B3 1180 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 METTL5Q9NRN9 209 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 KLHL14Q9P2G3 628 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 DUOX1Q9NRD9 1551 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 IGSF9BQ9UPX0 1349 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 POTEMA6NI47 508 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 DDX3YO15523 660 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 BAG3O95817 575 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 ABCB4P21439 1286 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TRIM28Q13263 835 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TAOK1Q7L7X3 1001 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 NLRP10Q86W26 655 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TRIM50Q86XT4 487 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 ZDHHC14Q8IZN3 488 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 CKAP2Q8WWK9 683 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 ALG3Q92685 438 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 AK8Q96MA6 479 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 RAB3IPQ96QF0 476 aaPredicted RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 RIOK1Q9BRS2 568 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TBC1D10AQ9BXI6 508 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 DENND2DQ9H6A0 471 aaPredicted RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 TRMT112Q9UI30 125 aaKnown RBP11.83□□□□□ -0.52
SFXN3-204ENST00000466982 AMFRQ9UKV5 643 aa11.83□□□□□ -0.52
SFXN3-204ENST00000466982 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
SFXN3-204ENST00000466982 DDX3XO00571 662 aaKnown RBP eCLIP11.82□□□□□ -0.52
SFXN3-204ENST00000466982 H2AFZP0C0S5 128 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 EPS15P42566 896 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 MAPK7Q13164 816 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 SLC44A4Q53GD3 710 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 TTC27Q6P3X3 843 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 H2AFVQ71UI9 128 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 PTPRN2Q92932 1015 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 UIMC1Q96RL1 719 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 DNAJC17Q9NVM6 304 aaKnown RBP11.82□□□□□ -0.52
SFXN3-204ENST00000466982 CNOT7Q9UIV1 285 aaKnown RBP11.82□□□□□ -0.52
SFXN3-204ENST00000466982 CHMP2BQ9UQN3 213 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 TIMM22Q9Y584 194 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 PVALEFA0A1B0GWK0 134 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 CBX6O95503 412 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 GOLGA8HP0CJ92 632 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 UCHL3P15374 230 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 ACADSP16219 412 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 GALCP54803 685 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 ARPC4P59998 168 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 RCN2Q14257 317 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 LLGL1Q15334 1064 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 DPY19L2P1Q6NXN4 242 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.82□□□□□ -0.52
SFXN3-204ENST00000466982 ARHGAP18Q8N392 663 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 GJA10Q969M2 543 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 DDX50Q9BQ39 737 aaKnown RBP11.82□□□□□ -0.52
SFXN3-204ENST00000466982 ATP8A2Q9NTI2 1148 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 HESX1Q9UBX0 185 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 TBK1Q9UHD2 729 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 PTPN22Q9Y2R2 807 aa11.82□□□□□ -0.52
SFXN3-204ENST00000466982 LAD1O00515 517 aa11.81□□□□□ -0.52
SFXN3-204ENST00000466982 T-ENOLP0DO92 83 aa11.81□□□□□ -0.52
SFXN3-204ENST00000466982 FOXN2P32314 431 aa11.81□□□□□ -0.52
SFXN3-204ENST00000466982 PTGIRP43119 386 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms