RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 METTL13Q8N6R0 699 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 LSM14AQ8ND56 463 aaKnown RBP14.39□□□□□ -0.11
UBR4-210ENST00000466969 ELSPBP1Q96BH3 223 aa14.39□□□□□ -0.11
UBR4-210ENST00000466969 TRMT61BQ9BVS5 477 aaKnown RBP14.39□□□□□ -0.11
UBR4-210ENST00000466969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBR4-210ENST00000466969 RBM12Q9NTZ6 932 aaKnown RBP14.39□□□□□ -0.11
UBR4-210ENST00000466969 TEP1Q99973 2627 aaKnown RBP14.39□□□□□ -0.11
UBR4-210ENST00000466969 CACNA1EQ15878 2313 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 COL1A2P08123 1366 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
UBR4-210ENST00000466969 CAPN9O14815 690 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 PHKA2P46019 1235 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 PXNP49023 591 aaPredicted RBP14.38□□□□□ -0.11
UBR4-210ENST00000466969 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
UBR4-210ENST00000466969 ZNF423Q2M1K9 1284 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 PPM1LQ5SGD2 360 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 LILRA6Q6PI73 481 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 Q6ZS52 159 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 ING5Q8WYH8 240 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 MCRS1Q96EZ8 462 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 CRELD1Q96HD1 420 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 ECHDC1Q9NTX5 307 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 SLC9A2Q9UBY0 812 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 KCNH3Q9ULD8 1083 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 CFAP46Q8IYW2 2715 aa14.38□□□□□ -0.11
UBR4-210ENST00000466969 ASCC3Q8N3C0 2202 aaKnown RBP14.38□□□□□ -0.11
UBR4-210ENST00000466969 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
UBR4-210ENST00000466969 CCL16O15467 120 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 OFD1O75665 1012 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 HOXC13P31276 330 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 DSG1Q02413 1049 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 MTMR1Q13613 665 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 ZNF484Q5JVG2 852 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 DGKKQ5KSL6 1271 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 TANGO2Q6ICL3 276 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 C1orf228Q6PIY5 440 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 RAB44Q7Z6P3 723 aaPredicted RBP14.37□□□□□ -0.11
UBR4-210ENST00000466969 HOMER1Q86YM7 354 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 ZNF334Q9HCZ1 680 aaPredicted RBP14.37□□□□□ -0.11
UBR4-210ENST00000466969 TRPV5Q9NQA5 729 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 C2orf42Q9NWW7 574 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 GDE1Q9NZC3 331 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 AKT3Q9Y243 479 aa14.37□□□□□ -0.11
UBR4-210ENST00000466969 MRPS23Q9Y3D9 190 aaKnown RBP14.37□□□□□ -0.11
UBR4-210ENST00000466969 FOXP2O15409 715 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 B4GALT3O60512 393 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 HMMRO75330 724 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 DDHD2O94830 711 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 CREMQ03060 361 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 PABPC1LQ4VXU2 614 aaKnown RBP14.36□□□□□ -0.11
UBR4-210ENST00000466969 CCDC178Q5BJE1 867 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
UBR4-210ENST00000466969 MTMR8Q96EF0 704 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 SCLT1Q96NL6 688 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 MAP7D2Q96T17 732 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 DUSP15Q9H1R2 295 aaPredicted RBP14.36□□□□□ -0.11
UBR4-210ENST00000466969 CHST12Q9NRB3 414 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 FNIP2Q9P278 1114 aa14.36□□□□□ -0.11
UBR4-210ENST00000466969 PRG3Q9Y2Y8 225 aaPredicted RBP14.36□□□□□ -0.11
UBR4-210ENST00000466969 C8AP07357 584 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 FGFR4P22455 802 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 GDI1P31150 447 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 ACTR2P61160 394 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 MFSD6Q6ZSS7 791 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 CUL5Q93034 780 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 MSANTD3Q96H12 275 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 ZFP14Q9HCL3 533 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
UBR4-210ENST00000466969 KLRF2D3W0D1 207 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 BACH1O14867 736 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 MAFGO15525 162 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 C22orf31O95567 290 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
UBR4-210ENST00000466969 ITGB5P18084 799 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 HOXA9P31269 272 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 OR1G1P47890 313 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 ZMYM1Q5SVZ6 1142 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 PDXDC2PQ6P474 469 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 IQCA1Q86XH1 822 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 MAP4K3Q8IVH8 894 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 ESR2Q92731 530 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 PGBD4Q96DM1 585 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 GPATCH3Q96I76 525 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 MBOAT7Q96N66 472 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 TRAIPQ9BWF2 469 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 APOL6Q9BWW8 343 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 WDR81Q562E7 1941 aa14.34□□□□□ -0.11
UBR4-210ENST00000466969 PTPN13Q12923 2485 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 MEIS3P2A8K0S8 358 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 RPL17P18621 184 aaKnown RBP14.33□□□□□ -0.12
UBR4-210ENST00000466969 TMOD1P28289 359 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 ABCG1P45844 678 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 CLCN3P51790 818 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 KARSQ15046 597 aaKnown RBP14.33□□□□□ -0.12
UBR4-210ENST00000466969 FAM160B1Q5W0V3 765 aa14.33□□□□□ -0.12
UBR4-210ENST00000466969 CCNI2Q6ZMN8 369 aaPredicted RBP14.33□□□□□ -0.12
UBR4-210ENST00000466969 RNF168Q8IYW5 571 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms