RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MTSS1O43312 755 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 PRAMEF4O60810 478 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 ARIH2O95376 493 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 KRT1P04264 644 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 ECHS1P30084 290 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 ADSLP30566 484 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 MRE11P49959 708 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 USP14P54578 494 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 DSC2Q02487 901 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 SEPT2Q15019 361 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 SAFBQ15424 915 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 MST1LQ2TV78 715 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 MCTP1Q6DN14 999 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 LARP4Q71RC2 724 aaKnown RBP eCLIP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 DRC7Q8IY82 874 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 CARFQ8N187 725 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 SAMD3Q8N6K7 520 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 TXNDC5Q8NBS9 432 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 ZBTB34Q8NCN2 500 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 ZNF526Q8TF50 670 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 HOXB13Q92826 284 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 GCDHQ92947 438 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 TIFAQ96CG3 184 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 SPATA25Q9BR10 227 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 CD320Q9NPF0 282 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 JADE2Q9NQC1 790 aa5.56□□□□□ -1.52
CDC42BPA-211ENST00000466538 PMS2P1A4D2B8 440 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 C2orf78A6NCI8 922 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 FAM227AF5H4B4 570 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 ALDH1A2O94788 518 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 UBXN7O94888 489 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 TSPAN15O95858 294 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 JUNP05412 331 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 NBPF7P0C2Y1 421 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 CSF2RBP32927 897 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 CRHR1P34998 444 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 RHBDL3P58872 404 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 CDC42EP1Q00587 391 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 ADAM15Q13444 863 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 BIRC2Q13490 618 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 IL10RAQ13651 578 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 Q6ZVL8 140 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 USP30Q70CQ3 517 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 OVCH2Q7RTZ1 564 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 KIAA0319LQ8IZA0 1049 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 OR7D4Q8NG98 312 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 OR2I1PQ8NGU4 316 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 NSUN6Q8TEA1 469 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 ZNF480Q8WV37 535 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 SLC7A6OSQ96CW6 309 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 CDK5RAP3Q96JB5 506 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 LCORQ96JN0 433 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 FAM167AQ96KS9 214 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 SLC6A15Q9H2J7 730 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 CALCOCO1Q9P1Z2 691 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 USP25Q9UHP3 1055 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 PCDHB1Q9Y5F3 818 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 PCDHA13Q9Y5I0 950 aa5.55□□□□□ -1.52
CDC42BPA-211ENST00000466538 FFAR3O14843 346 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 B3GALT2O43825 422 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 ALDH2P05091 517 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 C1QTNF9P0C862 333 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 RHCEP18577 417 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 FXR1P51114 621 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 AFF3P51826 1226 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 AGFG1P52594 562 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 CACNB3P54284 484 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 PER3P56645 1201 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 FAM193AP78312 1265 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 RHDQ02161 417 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 KIAA2012Q0VF49 1180 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 OS9Q13438 667 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 PICALMQ13492 652 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 NFYCQ13952 458 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 RAB39AQ14964 217 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 ANO6Q4KMQ2 910 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 COBLL1Q53SF7 1204 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 AGBL4Q5VU57 503 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 MCTP2Q6DN12 878 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 RHOT1Q8IXI2 618 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 LINC01356Q8N9X3 169 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 C3orf20Q8ND61 904 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 ADAMTS17Q8TE56 1095 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 CGRRF1Q99675 332 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 PTPN18Q99952 460 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 MSL2Q9HCI7 577 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 TDP1Q9NUW8 608 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 GPRC5DQ9NZD1 345 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 L1RE1Q9UN81 338 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 STXBP5LQ9Y2K9 1186 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
CDC42BPA-211ENST00000466538 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 A0A088AWK7 358 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 TPP1O14773 563 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 NRP1O14786 923 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 PEX14O75381 377 aa5.53□□□□□ -1.52
CDC42BPA-211ENST00000466538 VSIG10L2P0DP72 767 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms