RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 CELF3Q5SZQ8 465 aaKnown RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 RNF10Q8N5U6 811 aaKnown RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 AFAP1L1Q8TED9 768 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 ZBTB45Q96K62 511 aaPredicted RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 PNKPQ96T60 521 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 MPHOSPH6Q99547 160 aaKnown RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 AZI2Q9H6S1 392 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 SMARCAL1Q9NZC9 954 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 EHD2Q9NZN4 543 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 PACSIN2Q9UNF0 486 aaPredicted RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 ZC3H4Q9UPT8 1303 aaKnown RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 CCL15-CCL14A0A0B4J2E2 113 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 BTBD19C9JJ37 291 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 NAMPTP43490 491 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 WNT7BP56706 349 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 STRN3Q13033 797 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 CCL15Q16663 113 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 PTPROQ16827 1216 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 LMBRD2Q68DH5 695 aaPredicted RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 MFSD14AQ96MC6 490 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 FBXL18Q96ME1 805 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 SPATA33Q96N06 139 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 OSBPL9Q96SU4 736 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 TLR10Q9BXR5 811 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 HAPLN2Q9GZV7 340 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 GOLPH3Q9H4A6 298 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 P4HA2O15460 535 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 USP8P40818 1118 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 CAPSQ13938 189 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 GJC2Q5T442 439 aaPredicted RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 PAXIP1Q6ZW49 1069 aaPredicted RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 VPS36Q86VN1 386 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 SLC20A1Q8WUM9 679 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 ZBTB10Q96DT7 871 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 SEPT11Q9NVA2 429 aaKnown RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 ARGLU1Q9NWB6 273 aaPredicted RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 PNMA3Q9UL41 463 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 GRID2IPA4D2P6 1211 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 TXNP10599 105 aaKnown RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 GARTP22102 1010 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 RFC5P40937 340 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 ACOT2P49753 483 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 NLRP11P59045 1033 aaKnown RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 C2orf54Q08AI8 447 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 BMS1Q14692 1282 aaKnown RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 KRT39Q6A163 491 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 CCDC62Q6P9F0 684 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 PALB2Q86YC2 1186 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 CREG2Q8IUH2 290 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 LRRC71Q8N4P6 559 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 GPRC5AQ8NFJ5 357 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 SLC30A5Q8TAD4 765 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 TAS1R2Q8TE23 839 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 TRAPPC12Q8WVT3 735 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 SYT11Q9BT88 431 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 TARS2Q9BW92 718 aaKnown RBP14.68□□□□□ -0.06
UBE4B-206ENST00000466379 SUGCTQ9HAC7 445 aa14.68□□□□□ -0.06
UBE4B-206ENST00000466379 TTLL13PA6NNM8 815 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 H0YCG3 227 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 K7ERI5 159 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 ECM2O94769 699 aaPredicted RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 NOP2P46087 812 aaKnown RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 CKAP4Q07065 602 aaKnown RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 ZBTB41Q5SVQ8 909 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 C10orf76Q5T2E6 689 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 TMCO3Q6UWJ1 677 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 ARMCX2Q7L311 632 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 PPM1KQ8N3J5 372 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 ZNF668Q96K58 619 aaPredicted RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 KREMEN1Q96MU8 473 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 TMEM8AQ9HCN3 771 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 TAS2R14Q9NYV8 317 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 ANKFY1Q9P2R3 1169 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 HYOU1Q9Y4L1 999 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 SIP14410 1827 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 MAFO75444 373 aaPredicted RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 CETPP11597 493 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 HARSP12081 509 aaKnown RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 MATR3P43243 847 aaKnown RBP eCLIP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 CBX1P83916 185 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 KIF22Q14807 665 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 PLCB4Q15147 1175 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 SEZ6Q53EL9 994 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 SV2AQ7L0J3 742 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 SHCBP1Q8NEM2 672 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 TMC2Q8TDI7 906 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 PRPF31Q8WWY3 499 aaKnown RBP14.67□□□□□ -0.06
UBE4B-206ENST00000466379 PI4K2AQ9BTU6 479 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 ACP6Q9NPH0 428 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 PCDHGC5Q9Y5F6 944 aa14.67□□□□□ -0.06
UBE4B-206ENST00000466379 PLXNB2O15031 1838 aa14.66□□□□□ -0.06
UBE4B-206ENST00000466379 ZNF233A6NK53 670 aa14.66□□□□□ -0.06
UBE4B-206ENST00000466379 ZBTB42B2RXF5 422 aa14.66□□□□□ -0.06
UBE4B-206ENST00000466379 EXTL3O43909 919 aa14.66□□□□□ -0.06
UBE4B-206ENST00000466379 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
UBE4B-206ENST00000466379 LGR5O75473 907 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms