RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 RELTQ969Z4 430 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 ASIC4Q96FT7 647 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 MSLNLQ96KJ4 702 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 GSDMAQ96QA5 445 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 RMDN3Q96TC7 470 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 PRRX2Q99811 253 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 PDCD2LQ9BRP1 358 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 KATNAL1Q9BW62 490 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 AVENQ9NQS1 362 aaPredicted RBP8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 SPATA7Q9P0W8 599 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 CLEC1BQ9P126 229 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 DDX41Q9UJV9 622 aaKnown RBP8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 MKL2Q9ULH7 1088 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 PRKAB1Q9Y478 270 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
RPUSD3-212ENST00000466141 ZFHX4Q86UP3 3567 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 DCHS1Q96JQ0 3298 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 MYH9P35579 1960 aaKnown RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 ESYT2A0FGR8 921 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 C5orf67F2Z3F1 127 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 GCOM1H8Y6P7 765 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 TREHO43280 583 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 NCK2O43639 380 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 GLP2RO95838 553 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 FOSP01100 380 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 TPM1P09493 284 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 POLR2MP0CAP2 368 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 SCG2P13521 617 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 DNAJB1P25685 340 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 BMPR1AP36894 532 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 NASPP49321 788 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 AMPD3Q01432 767 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 SIGLEC14Q08ET2 396 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 CCDC173Q0VFZ6 552 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 ST3GAL1Q11201 340 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 SCRN1Q12765 414 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 POSTNQ15063 836 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 PGM5Q15124 567 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 LONRF1Q17RB8 773 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 COBLL1Q53SF7 1204 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 USP17L6PQ6QN14 398 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 RELL1Q8IUW5 271 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 PPTC7Q8NI37 304 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 UHMK1Q8TAS1 419 aaKnown RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 MIPOL1Q8TD10 442 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 ATP6V0A1Q93050 837 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 PHKBQ93100 1093 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 RPGRIP1Q96KN7 1286 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 ASB16Q96NS5 453 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 C11orf84Q9BUA3 381 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 ACBD3Q9H3P7 528 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 SPATS2LQ9NUQ6 558 aaKnown RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 MKS1Q9NXB0 559 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 TRMT1Q9NXH9 659 aaKnown RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 BARHL2Q9NY43 387 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 TMEM98Q9Y2Y6 226 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 USP15Q9Y4E8 981 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 N6AMT1Q9Y5N5 214 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 V9GY48 417 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 PTPRZ1P23471 2315 aaPredicted RBP8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 KAT6AQ92794 2004 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 ADGRA3Q8IWK6 1321 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 STK36Q9NRP7 1315 aa8.03□□□□□ -1.12
RPUSD3-212ENST00000466141 C17orf102A2RUQ5 167 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 PRR23AA6NEV1 266 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 B4DLN1 442 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 PRPF3O43395 683 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 PFKFB2O60825 505 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 EYA4O95677 639 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 MMP1P03956 469 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 NR3C2P08235 984 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 RBP3P10745 1247 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 SP100P23497 879 aaPredicted RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 RRM1P23921 792 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 NEK4P51957 841 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 MRPL12P52815 198 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 NAPAP54920 295 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 MRPS9P82933 396 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 ARID5AQ03989 594 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 COX10Q12887 443 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 BIRC3Q13489 604 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 LAMC2Q13753 1193 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 CBX2Q14781 532 aaPredicted RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 ANKRD1Q15327 319 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 STXBP2Q15833 593 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 UBE2SQ16763 222 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 HSDL1Q3SXM5 330 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 ARHGEF16Q5VV41 709 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 FAAH2Q6GMR7 532 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 RBM23Q86U06 439 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 FCHSD1Q86WN1 690 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 SPATS2Q86XZ4 545 aaKnown RBP8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 BRSK2Q8IWQ3 736 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 PLPP6Q8IY26 295 aa8.02□□□□□ -1.13
RPUSD3-212ENST00000466141 SMRP1Q8NCR6 262 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms