RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 TSHZ2Q9NRE2 1034 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 DZANK1Q9NVP4 752 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 HES2Q9Y543 173 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 POTEMA6NI47 508 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 C2CD4DB7Z1M9 353 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 SSBP05455 408 aaKnown RBP eCLIP23.18■■□□□ 1.3
CSPG5-204ENST00000465441 SPATA31C1P0DKV0 1188 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 MCM7P33993 719 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 ATAT1Q5SQI0 421 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 PPFIBP1Q86W92 1011 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 COLGALT2Q8IYK4 626 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 CCDC51Q96ER9 411 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 RIPOR3Q96MK2 946 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 STK39Q9UEW8 545 aa23.18■■□□□ 1.3
CSPG5-204ENST00000465441 ARID2Q68CP9 1835 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 CNPP09543 421 aaKnown RBP23.17■■□□□ 1.3
CSPG5-204ENST00000465441 ARF4P18085 180 aaPredicted RBP23.17■■□□□ 1.3
CSPG5-204ENST00000465441 KLRC2P26717 231 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 NHLH1Q02575 133 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 SAFBQ15424 915 aaKnown RBP eCLIP23.17■■□□□ 1.3
CSPG5-204ENST00000465441 IER5LQ5T953 404 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 MAEAQ7L5Y9 396 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 TAS1R1Q7RTX1 841 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 CATSPER3Q86XQ3 398 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 FEZF2Q8TBJ5 459 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 ASIC4Q96FT7 647 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 CCDC43Q96MW1 224 aaKnown RBP23.17■■□□□ 1.3
CSPG5-204ENST00000465441 NFKBIZQ9BYH8 718 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 POLR3FQ9H1D9 316 aaPredicted RBP23.17■■□□□ 1.3
CSPG5-204ENST00000465441 LIMCH1Q9UPQ0 1083 aa23.17■■□□□ 1.3
CSPG5-204ENST00000465441 PRG3Q9Y2Y8 225 aaPredicted RBP23.17■■□□□ 1.3
CSPG5-204ENST00000465441 MUC6Q6W4X9 2439 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 ARL5CA6NH57 179 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 INPPL1O15357 1258 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 MLH1P40692 756 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 OR1G1P47890 313 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 KIAA1841Q6NSI8 718 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 ZBTB33Q86T24 672 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 CABP7Q86V35 215 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 CDR2LQ86X02 465 aaPredicted RBP23.16■■□□□ 1.3
CSPG5-204ENST00000465441 CCDC83Q8IWF9 413 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 FBXL6Q8N531 539 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 APOL6Q9BWW8 343 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 EMILIN2Q9BXX0 1053 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 TUFT1Q9NNX1 390 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 GPRC5CQ9NQ84 441 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 MRPL17Q9NRX2 175 aaKnown RBP23.16■■□□□ 1.3
CSPG5-204ENST00000465441 MARCH5Q9NX47 278 aa23.16■■□□□ 1.3
CSPG5-204ENST00000465441 B4GALT5O43286 388 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 USO1O60763 962 aaKnown RBP23.15■■□□□ 1.3
CSPG5-204ENST00000465441 MED24O75448 989 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 SOD2P04179 222 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 SCNN1GP51170 649 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 CLCN4P51793 760 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 ZNF174Q15697 407 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 TMC5Q6UXY8 1006 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 SUGP1Q8IWZ8 645 aaKnown RBP23.15■■□□□ 1.3
CSPG5-204ENST00000465441 KREMEN2Q8NCW0 462 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 C8orf76Q96K31 380 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 ZFP42Q96MM3 310 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 TRIM6Q9C030 488 aaPredicted RBP23.15■■□□□ 1.3
CSPG5-204ENST00000465441 DBR1Q9UK59 544 aaKnown RBP23.15■■□□□ 1.3
CSPG5-204ENST00000465441 GIT1Q9Y2X7 761 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 MYO10Q9HD67 2058 aa23.15■■□□□ 1.3
CSPG5-204ENST00000465441 TRIOO75962 3097 aa23.14■■□□□ 1.29
CSPG5-204ENST00000465441 ZNF318Q5VUA4 2279 aa23.14■■□□□ 1.29
CSPG5-204ENST00000465441 C2CD2LO14523 706 aa23.14■■□□□ 1.29
CSPG5-204ENST00000465441 AKAP5P24588 427 aa23.14■■□□□ 1.29
CSPG5-204ENST00000465441 DSC1Q08554 894 aa23.14■■□□□ 1.29
CSPG5-204ENST00000465441 POLR3CQ9BUI4 534 aaPredicted RBP23.14■■□□□ 1.29
CSPG5-204ENST00000465441 NXF3Q9H4D5 531 aaKnown RBP23.14■■□□□ 1.29
CSPG5-204ENST00000465441 A0A1B0GUA9 196 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 NPTXRO95502 500 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 EFEMP2O95967 443 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 GPR149Q86SP6 731 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 GSTCDQ8NEC7 633 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 PRSS33Q8NF86 280 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 NACC1Q96RE7 527 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 RPS6KC1Q96S38 1066 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 LLPHQ9BRT6 129 aaKnown RBP23.13■■□□□ 1.29
CSPG5-204ENST00000465441 HERC2P3Q9BVR0 1158 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 LIMD1Q9UGP4 676 aa23.13■■□□□ 1.29
CSPG5-204ENST00000465441 LRRIQ4A6NIV6 560 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 F8W810 466 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 KIAA0319Q5VV43 1072 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 SLC27A1Q6PCB7 646 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 HACE1Q8IYU2 909 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 RNF168Q8IYW5 571 aaPredicted RBP23.12■■□□□ 1.29
CSPG5-204ENST00000465441 ZDHHC14Q8IZN3 488 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 FOXP1Q9H334 677 aaPredicted RBP23.12■■□□□ 1.29
CSPG5-204ENST00000465441 SFXN1Q9H9B4 322 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 SORCS3Q9UPU3 1222 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 USTQ9Y2C2 406 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 SSX2IPQ9Y2D8 614 aa23.12■■□□□ 1.29
CSPG5-204ENST00000465441 NR1I2O75469 434 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 URODP06132 367 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 RPA1P27694 616 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 PLCD3Q8N3E9 789 aa23.11■■□□□ 1.29
CSPG5-204ENST00000465441 TDRD5Q8NAT2 981 aaKnown RBP23.11■■□□□ 1.29
CSPG5-204ENST00000465441 MCPH1Q8NEM0 835 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms