RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 KIFAP3Q92845 792 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 DHX58Q96C10 678 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 DRC1Q96MC2 740 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 PANK2Q9BZ23 570 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 DHX33Q9H6R0 707 aaKnown RBP19.27■□□□□ 0.68
CPSF4-209ENST00000465132 CWH43Q9H720 699 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 ELAC1Q9H777 363 aaKnown RBP19.27■□□□□ 0.68
CPSF4-209ENST00000465132 TLR9Q9NR96 1032 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 MBD3O95983 291 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 CYP11B2P19099 503 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 SCP2P22307 547 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 CLCN3P51790 818 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 NDUFA8P51970 172 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 NPEPPSP55786 919 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 ERVFC1P60507 584 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 EMC2Q15006 297 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 PPP2R5AQ15172 486 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 ECM1Q16610 540 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 EFCAB12Q6NXP0 572 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 LINC01465Q8N7H1 131 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 CNNM3Q8NE01 707 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 TIGD1Q96MW7 591 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 C17orf75Q9HAS0 396 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 ODF2LQ9ULJ1 636 aa19.26■□□□□ 0.67
CPSF4-209ENST00000465132 USP15Q9Y4E8 981 aaPredicted RBP19.26■□□□□ 0.67
CPSF4-209ENST00000465132 PLXNA4Q9HCM2 1894 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 LOC730098B7Z3J9 87 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 PER2O15055 1255 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 ZNF202O95125 648 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 LAG3P18627 525 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 GUCY2CP25092 1073 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 ABCD1P33897 745 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 NLRP11P59045 1033 aaKnown RBP19.25■□□□□ 0.67
CPSF4-209ENST00000465132 TFDP1Q14186 410 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 PDE12Q6L8Q7 609 aaKnown RBP19.25■□□□□ 0.67
CPSF4-209ENST00000465132 GPBP1Q86WP2 473 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 PSPC1Q8WXF1 523 aaKnown RBP19.25■□□□□ 0.67
CPSF4-209ENST00000465132 EDAQ92838 391 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 CCDC47Q96A33 483 aaKnown RBP19.25■□□□□ 0.67
CPSF4-209ENST00000465132 IFT74Q96LB3 600 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 CDCA3Q99618 268 aaPredicted RBP19.25■□□□□ 0.67
CPSF4-209ENST00000465132 KCNH6Q9H252 994 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 ADAMTS10Q9H324 1103 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 PHLPP2Q6ZVD8 1323 aa19.25■□□□□ 0.67
CPSF4-209ENST00000465132 FNDC1Q4ZHG4 1894 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-209ENST00000465132 IGKV6-21A0A0C4DH24 114 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 FSD2A1L4K1 749 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 FSCN2O14926 492 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 USO1O60763 962 aaKnown RBP19.24■□□□□ 0.67
CPSF4-209ENST00000465132 TBCAO75347 108 aaKnown RBP19.24■□□□□ 0.67
CPSF4-209ENST00000465132 SLC12A3P55017 1021 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 RBM10P98175 930 aaKnown RBP19.24■□□□□ 0.67
CPSF4-209ENST00000465132 E2F4Q16254 413 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 DUSP6Q16828 381 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 TPRNQ4KMQ1 711 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 RINT1Q6NUQ1 792 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 ELOA2Q8IYF1 753 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-209ENST00000465132 VN1R2Q8NFZ6 395 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 MFSD14AQ96MC6 490 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 TMEM117Q9H0C3 514 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 BLOC1S4Q9NUP1 217 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 RNF19AQ9NV58 838 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 AKT3Q9Y243 479 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 LZTS1Q9Y250 596 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 EVPLQ92817 2033 aa19.24■□□□□ 0.67
CPSF4-209ENST00000465132 H0YCG3 227 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 ZBTB39O15060 712 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 HOXA2O43364 376 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 EIF4BP23588 611 aaKnown RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 MCM4P33991 863 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 PLCB3Q01970 1234 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 DHX8Q14562 1220 aaKnown RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 MCM6Q14566 821 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 CBX2Q14781 532 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 LRRC55Q6ZSA7 311 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 C1orf186Q6ZWK4 172 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 ALYREFQ86V81 257 aaKnown RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 FMR1NBQ8N0W7 255 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 LRRC71Q8N4P6 559 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 FBXL18Q96ME1 805 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 CASD1Q96PB1 797 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 PHF7Q9BWX1 381 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 GTPBP4Q9BZE4 634 aaKnown RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 INO80BQ9C086 356 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 KBTBD4Q9NVX7 518 aa19.23■□□□□ 0.67
CPSF4-209ENST00000465132 LARSQ9P2J5 1176 aaKnown RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 SUCLA2Q9P2R7 463 aaPredicted RBP19.23■□□□□ 0.67
CPSF4-209ENST00000465132 ZSCAN20P17040 1043 aaPredicted RBP19.22■□□□□ 0.67
CPSF4-209ENST00000465132 SMTNP53814 917 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 KCNK18Q7Z418 384 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 CCDC65Q8IXS2 484 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 SUSD6Q92537 303 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 SCLT1Q96NL6 688 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 CEP89Q96ST8 783 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 PUF60Q9UHX1 559 aaKnown RBP19.22■□□□□ 0.67
CPSF4-209ENST00000465132 COL4A3BPQ9Y5P4 624 aa19.22■□□□□ 0.67
CPSF4-209ENST00000465132 MYH11P35749 1972 aa19.21■□□□□ 0.67
CPSF4-209ENST00000465132 C5orf42Q9H799 3197 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms