RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 TTC19Q6DKK2 380 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 PPM1KQ8N3J5 372 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
TSPAN4-210ENST00000464987 LCTP09848 1927 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 BHMG1C9JSJ3 638 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 P4HA2O15460 535 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 ATMINO43313 823 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 OPA1O60313 960 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 CHRNB2P17787 502 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 SFNP31947 248 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 FLT3P36888 993 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 PRPF4BQ13523 1007 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 NOP9Q86U38 636 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 SLC47A2Q86VL8 602 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 MREGQ8N565 214 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 ALG3Q92685 438 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 ANKEF1Q9NU02 776 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 PCDHA10Q9Y5I2 948 aa20.2■□□□□ 0.82
TSPAN4-210ENST00000464987 CYP26A1O43174 497 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 STBD1O95210 358 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 PPFIA1Q13136 1202 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 SKIDA1Q1XH10 827 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 NLRX1Q86UT6 975 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 MAP4K3Q8IVH8 894 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 EPS8L1Q8TE68 723 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 WHAMMQ8TF30 809 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 CEP170P1Q96L14 293 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 ERVK-5Q9HDB9 667 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 ZNF214Q9UL59 606 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 CCDC188H7C350 402 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 KCNA2P16389 499 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 PTPRAP18433 802 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 TGFB2P61812 414 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 DMP1Q13316 513 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 SCYL3Q8IZE3 742 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 ZNF280CQ8ND82 737 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 PARD3BQ8TEW8 1205 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 KMT5AQ9NQR1 393 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 LCMT1Q9UIC8 334 aa20.19■□□□□ 0.82
TSPAN4-210ENST00000464987 DAPK3O43293 454 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 SHOX2O60902 331 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 CCND2P30279 289 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 MARCKSL1P49006 195 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 TMEM132BQ14DG7 1078 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 SWSAP1Q6NVH7 229 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 CPNE8Q86YQ8 564 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 SAMD3Q8N6K7 520 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 RNPC3Q96LT9 517 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 TIPINQ9BVW5 301 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 RABEP2Q9H5N1 569 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 NOCTQ9UK39 431 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 USP20Q9Y2K6 914 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 ALG6Q9Y672 507 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 POLR2AP24928 1970 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 TMEM110-MUSTN1A8MSY1 372 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 MAPK13O15264 365 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 CALCAP01258 141 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 MMEP08473 750 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 POU5F1Q01860 360 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 FMNL3Q8IVF7 1028 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 CCDC60Q8IWA6 550 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 KRT35Q92764 455 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 TRIM51Q9BSJ1 452 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 CTTNBP2NLQ9P2B4 639 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 DAAM1Q9Y4D1 1078 aa20.18■□□□□ 0.82
TSPAN4-210ENST00000464987 RPS12P25398 132 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 HSPA9P38646 679 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 SMTNP53814 917 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 UAP1Q16222 522 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 FAM71AQ8IYT1 594 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 TAS1R2Q8TE23 839 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 DHX38Q92620 1227 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 XPNPEP1Q9NQW7 623 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 GINM1Q9NU53 330 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 OR2W6PQ8NHA6 318 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 HELQQ8TDG4 1101 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 GPRASP2Q96D09 838 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 BTBD6Q96KE9 485 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 IWS1Q96ST2 819 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 DPH5Q9H2P9 285 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 PLAAQ9Y263 795 aa20.17■□□□□ 0.82
TSPAN4-210ENST00000464987 DSG3P32926 999 aa20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 IRAK1P51617 712 aa20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 FMO1Q01740 532 aa20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 KRT39Q6A163 491 aa20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 TAS1R3Q7RTX0 852 aa20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 TRIM31Q9BZY9 425 aa20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 TTC7AQ9ULT0 858 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-210ENST00000464987 GRIN2DO15399 1336 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 PEX10O60683 326 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 HSD17B3P37058 310 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 ATP1A2P50993 1020 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 SNRPFP62306 86 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 CUL1Q13616 776 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 ANGEL2Q5VTE6 544 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 RHOT2Q8IXI1 618 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 POMGNT1Q8WZA1 660 aa20.15■□□□□ 0.82
TSPAN4-210ENST00000464987 TATDN2Q93075 761 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms