RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 RFPL2O75678 378 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 ITGA4P13612 1032 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 PDIA3P30101 505 aaKnown RBP16.32■□□□□ 0.2
MCF2L-220ENST00000464800 HSPA4P34932 840 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 SSRP1Q08945 709 aaKnown RBP16.32■□□□□ 0.2
MCF2L-220ENST00000464800 LAMTOR4Q0VGL1 99 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 PPP2R5CQ13362 524 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 TAS1R1Q7RTX1 841 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-220ENST00000464800 SLC44A3Q8N4M1 653 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 DAGLBQ8NCG7 672 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 MYADMQ96S97 322 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-220ENST00000464800 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
MCF2L-220ENST00000464800 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-220ENST00000464800 IPPQ9Y573 584 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 DCHS1Q96JQ0 3298 aa16.32■□□□□ 0.2
MCF2L-220ENST00000464800 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 MYH15Q9Y2K3 1946 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 ARL5CA6NH57 179 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 M0R2N6 131 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 SLC37A4O43826 429 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 GAS2O43903 313 aaKnown RBP16.31■□□□□ 0.2
MCF2L-220ENST00000464800 NR1I2O75469 434 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 MYBP10242 640 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 MLH1P40692 756 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 DSG1Q02413 1049 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 EMC2Q15006 297 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 KIAA0319Q5VV43 1072 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 ZC3H14Q6PJT7 736 aaKnown RBP16.31■□□□□ 0.2
MCF2L-220ENST00000464800 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
MCF2L-220ENST00000464800 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
MCF2L-220ENST00000464800 HDAC7Q8WUI4 952 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 TCP11Q8WWU5 503 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 PIDD1Q9HB75 910 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 RXFP1Q9HBX9 757 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 VAV3Q9UKW4 847 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 R4GN57 208 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 DMDP11532 3685 aa16.31■□□□□ 0.2
MCF2L-220ENST00000464800 ASAP2O43150 1006 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 DEXIO95424 95 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 EFEMP2O95967 443 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 P4HBP07237 508 aaKnown RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 SPATA31D3P0C874 917 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 PSMA5P28066 241 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 SCNN1GP51170 649 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 EVCP57679 992 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 DSC1Q08554 894 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 PCBP1Q15365 356 aaKnown RBP eCLIP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 INF2Q27J81 1249 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 GALNT17Q6IS24 598 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 NOTUMQ6P988 496 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 SPATA31D4Q6ZUB0 917 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 GET4Q7L5D6 327 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 KRT25Q7Z3Z0 450 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 GPR152Q8TDT2 470 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 RIN2Q8WYP3 895 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 ZNF707Q96C28 371 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 CCDC51Q96ER9 411 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 FAM20AQ96MK3 541 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 GAD1Q99259 594 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 LXNQ9BS40 222 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 EIF2AQ9BY44 585 aaKnown RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 PLEKHA4Q9H4M7 779 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 ARHGEF3Q9NR81 526 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 ZDHHC7Q9NXF8 308 aa16.3■□□□□ 0.2
MCF2L-220ENST00000464800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-220ENST00000464800 EP300Q09472 2414 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-220ENST00000464800 F8W810 466 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 CPLX1O14810 134 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 TSPAN1O60635 241 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 PAPLNO95428 1278 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 C1RP00736 705 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 AXLP30530 894 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 YWHABP31946 246 aaKnown RBP16.29■□□□□ 0.2
MCF2L-220ENST00000464800 NPY5RQ15761 445 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 PHLDB3Q6NSJ2 640 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 PALB2Q86YC2 1186 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-220ENST00000464800 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 MTRQ99707 1265 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 COLEC11Q9BWP8 271 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 NT5C3AQ9H0P0 336 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 KCNMB3Q9NPA1 279 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.29■□□□□ 0.2
MCF2L-220ENST00000464800 SIT1Q9Y3P8 196 aa16.29■□□□□ 0.2
MCF2L-220ENST00000464800 DCNP07585 359 aaKnown RBP16.28■□□□□ 0.2
MCF2L-220ENST00000464800 LAMP2P13473 410 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 CREMQ03060 361 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 NCBP1Q09161 790 aaKnown RBP16.28■□□□□ 0.2
MCF2L-220ENST00000464800 HTR4Q13639 388 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 OTUD6AQ7L8S5 288 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
MCF2L-220ENST00000464800 KIAA2013Q8IYS2 634 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms