RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CLDN3O15551 220 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ABL2P42684 1182 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 BMT2Q1RMZ1 405 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 SLFN12Q8IYM2 578 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 UBL4BQ8N7F7 174 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ZSWIM2Q8NEG5 633 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM118BQ9BPY3 351 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
CLCNKA-204ENST00000464764 PODXLO00592 558 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM13AO94988 1023 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 SHMT1P34896 483 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 SIX1Q15475 284 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 PPP2R5EQ16537 467 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 PHLDB2Q86SQ0 1253 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 ERMNQ8TAM6 284 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 UTP4Q969X6 686 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 DNAJC18Q9H819 358 aa13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 ZMYND8Q9ULU4 1186 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-204ENST00000464764 ATAD5Q96QE3 1844 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 CALCAP01258 141 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 ALAS1P13196 640 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 BRAFP15056 766 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 GRAPQ13588 217 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 ANKRD20A1Q5TYW2 823 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 ANKRD20A3Q5VUR7 823 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 GRAPLQ8TC17 118 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 TMEM237Q96Q45 408 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 ADAM33Q9BZ11 813 aa13.52□□□□□ -0.25
CLCNKA-204ENST00000464764 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 CYP3A7-CYP3A51PA0A087WV96 503 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SGPL1O95470 568 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 CCND1P24385 295 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 CYP3A7P24462 503 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 GTF2IP78347 998 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 MYL7Q01449 175 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SLMAPQ14BN4 828 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SLC13A5Q86YT5 568 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 ZFPM1Q8IX07 1006 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SPOCK2Q92563 424 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 TMEM109Q9BVC6 243 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 ETNK1Q9HBU6 452 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SERPINB13Q9UIV8 391 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SPOPO43791 374 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 FOXN2P32314 431 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SCNN1DP51172 638 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 TBC1D10BQ4KMP7 808 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 ASRGL1Q7L266 308 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 ECHDC2Q86YB7 292 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 SRRM1Q8IYB3 904 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 LMO3Q8TAP4 145 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 AGPAT3Q9NRZ7 376 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 ARL2BPQ9Y2Y0 163 aa13.51□□□□□ -0.25
CLCNKA-204ENST00000464764 XIRP1Q702N8 1843 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 PPP1R12AO14974 1030 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 UBXN2AP68543 259 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 GPC5P78333 572 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 SATB1Q01826 763 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 DAB2IPQ5VWQ8 1189 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 CAPRIN2Q6IMN6 1127 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 MFSD5Q6N075 450 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 CKAP2Q8WWK9 683 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 MBOAT7Q96N66 472 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 HERPUD2Q9BSE4 406 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 CHST7Q9NS84 486 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 VAV3Q9UKW4 847 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 SPATA31A1Q5TZJ5 1347 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 EXOC3O60645 756 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 GCLMP48507 274 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 KRT17Q04695 432 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 CALCOCO2Q13137 446 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 MIGA2Q7L4E1 593 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 CCHCR1Q8TD31 782 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 CRYGNQ8WXF5 182 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 DYDC2Q96IM9 177 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 LBHD1Q9BQE6 289 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 PRKAG3Q9UGI9 489 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 FRMD4BQ9Y2L6 1034 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 SMNDC1O75940 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 GJB6O95452 261 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 EYA4O95677 639 aa13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 ATP2A2P16615 1042 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-204ENST00000464764 STX2P32856 288 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms