RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-210ENST00000463446 PAWRQ96IZ0 340 aaKnown RBP8.09□□□□□ -1.11
EPHA4-210ENST00000463446 FNBP1Q96RU3 617 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 ACO2Q99798 780 aaKnown RBP8.09□□□□□ -1.11
EPHA4-210ENST00000463446 FDXACB1Q9BRP7 624 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-210ENST00000463446 TRAIPQ9BWF2 469 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 SRRTQ9BXP5 876 aaKnown RBP8.09□□□□□ -1.11
EPHA4-210ENST00000463446 DNAJC25Q9H1X3 360 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 ADAMTS10Q9H324 1103 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 GPRC5CQ9NQ84 441 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 KANSL3Q9P2N6 904 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 GINS2Q9Y248 185 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 TELO2Q9Y4R8 837 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 NR2E3Q9Y5X4 410 aa8.09□□□□□ -1.11
EPHA4-210ENST00000463446 OGTO15294 1046 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 HOXA2O43364 376 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 EXTL3O43909 919 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 B4GALT4O60513 344 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 TPM1P09493 284 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 CLTAP09496 248 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 STAG3L1P0CL83 205 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 MYBP10242 640 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 NR2F2P24468 414 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 CASP1P29466 404 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 GTF2H1P32780 548 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 PAK2Q13177 524 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 MKRN4PQ13434 485 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-210ENST00000463446 IKBKEQ14164 716 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 KIZQ2M2Z5 673 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 CCDC40Q4G0X9 1142 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 CREBRFQ8IUR6 639 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 NELFCDQ8IXH7 590 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 GPD1LQ8N335 351 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 KIAA0895Q8NCT3 520 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 TMC2Q8TDI7 906 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 ERCC4Q92889 916 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-210ENST00000463446 ACAP3Q96P50 834 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 MSTO1Q9BUK6 570 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 CCDC94Q9BW85 323 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-210ENST00000463446 MTIF3Q9H2K0 278 aaKnown RBP8.08□□□□□ -1.12
EPHA4-210ENST00000463446 KCTD10Q9H3F6 313 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 HIPK3Q9H422 1215 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 ASB7Q9H672 318 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 AGPAT3Q9NRZ7 376 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 DMAC2Q9NW81 257 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 ARMCX3Q9UH62 379 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-210ENST00000463446 AGO2Q9UKV8 859 aaKnown RBP8.08□□□□□ -1.12
EPHA4-210ENST00000463446 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 SSUH2Q9Y2M2 353 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 GDAQ9Y2T3 454 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 NFE2L3Q9Y4A8 694 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 CDY2AQ9Y6F7 541 aa8.08□□□□□ -1.12
EPHA4-210ENST00000463446 GRIN2DO15399 1336 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 CNTNAP2Q9UHC6 1331 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 A0A0B4J269 797 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 ABHD14A-ACY1A0A1B0GW23 586 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 P4HA2O15460 535 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 NRDCO43847 1150 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 PQBP1O60828 265 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 ZNF623O75123 536 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TIMP1P01033 207 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 NR3C1P04150 777 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 RAG1P15918 1043 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TRIM21P19474 475 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 BMP6P22004 513 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 MTIF2P46199 727 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 MARSP56192 900 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TLE2Q04725 743 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 MBTD1Q05BQ5 628 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 MCL1Q07820 350 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 NFX1Q12986 1120 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 ZC2HC1CQ53FD0 456 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TCP11X2Q5H9J9 407 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TTI2Q6NXR4 508 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 SLC24A5Q71RS6 500 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 LRRC8DQ7L1W4 858 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 LRRC15Q8TF66 581 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 FIZ1Q96SL8 496 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 LBHD1Q9BQE6 289 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 CCDC113Q9H0I3 377 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TRPV6Q9H1D0 765 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 RPF1Q9H9Y2 349 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 CBX8Q9HC52 389 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 TRMT13Q9NUP7 481 aaKnown RBP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 SLC38A7Q9NVC3 462 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 ST3GAL5Q9UNP4 418 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 CTNND2Q9UQB3 1225 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 DERAQ9Y315 318 aa8.07□□□□□ -1.12
EPHA4-210ENST00000463446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.07□□□□□ -1.12
EPHA4-210ENST00000463446 A0A0U1RQF3 1178 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 ARHGEF37A1IGU5 675 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 KIAA0355O15063 1070 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 PMM2O15305 246 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 TGFB1I1O43294 461 aa8.06□□□□□ -1.12
EPHA4-210ENST00000463446 EVI5O60447 810 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms