RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
PHACTR4-203ENST00000463428 CHST12Q9NRB3 414 aa15.22■□□□□ 0.03
PHACTR4-203ENST00000463428 TYW1Q9NV66 732 aaKnown RBP15.22■□□□□ 0.03
PHACTR4-203ENST00000463428 PSMA7O14818 248 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 MGEA5O60502 916 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 TOM1L1O75674 476 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 CSF2RAP15509 400 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 RGS19P49795 217 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 SNRPFP62306 86 aaKnown RBP15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 STIM1Q13586 685 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 UBXN11Q5T124 520 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 ANKRD40Q6AI12 368 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 KLHL10Q6JEL2 608 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 TTI2Q6NXR4 508 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 FOXR2Q6PJQ5 311 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 RTN4RL1Q86UN2 441 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 CDR2LQ86X02 465 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 C12orf56Q8IXR9 622 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 SYCP3Q8IZU3 236 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 TMEM174Q8WUU8 243 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 NELFBQ8WX92 580 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 DPF3Q92784 378 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 P2RX5Q93086 422 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 AGPAT3Q9NRZ7 376 aa15.21■□□□□ 0.03
PHACTR4-203ENST00000463428 TRIM49BA6NDI0 452 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 HNRNPDLO14979 420 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 ERCC5P28715 1186 aaPredicted RBP15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 LIG4P49917 911 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 MCL1Q07820 350 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 PAK1Q13153 545 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 NFIL3Q16649 462 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 ANO6Q4KMQ2 910 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 FAM43BQ6ZT52 329 aaPredicted RBP15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 TMEM199Q8N511 208 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 BADQ92934 168 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 DUSP9Q99956 384 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 PRKAG2Q9UGJ0 569 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 DACH1Q9UI36 760 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 CTNND2Q9UQB3 1225 aa15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 PIN4Q9Y237 131 aaKnown RBP15.2■□□□□ 0.02
PHACTR4-203ENST00000463428 MICAL3Q7RTP6 2002 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 A0A0B4J269 797 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 N4BP3O15049 544 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 CLIC2O15247 247 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 SYN1P17600 705 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 GARTP22102 1010 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 STX17P56962 302 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 NCBP1Q09161 790 aaKnown RBP15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 EDRF1Q3B7T1 1238 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 NOTUMQ6P988 496 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 C16orf59Q7L2K0 433 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 DEFB128Q7Z7B8 93 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 SLC9A9Q8IVB4 645 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 ZC3H3Q8IXZ2 948 aaKnown RBP15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 LINC01599Q8WXQ3 324 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 SEPT8Q92599 483 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 BICD1Q96G01 975 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 CDT1Q9H211 546 aa15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 ZMYND8Q9ULU4 1186 aaPredicted RBP15.19■□□□□ 0.02
PHACTR4-203ENST00000463428 CALUO43852 315 aaPredicted RBP15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 FAM189A1O60320 539 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 LRRC63Q05C16 580 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 MYBPC2Q14324 1141 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 SLFN12LQ6IEE8 588 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 CNKSR3Q6P9H4 555 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 SLC27A1Q6PCB7 646 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 HS2ST1Q7LGA3 356 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 ZSWIM2Q8NEG5 633 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 GOLGA5Q8TBA6 731 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 APBB2Q92870 758 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 FTHL17Q9BXU8 183 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 EIF2AQ9BY44 585 aaKnown RBP15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 TTC3P53804 2025 aa15.18■□□□□ 0.02
PHACTR4-203ENST00000463428 ENPP3O14638 875 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 CLDN3O15551 220 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 PFKMP08237 780 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 MCF2P10911 925 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ZNF568Q3ZCX4 644 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ZBTB33Q86T24 672 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ENOX1Q8TC92 643 aaKnown RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ADAM2Q99965 735 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 BPIFA3Q9BQP9 254 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 TSPYL2Q9H2G4 693 aaPredicted RBP15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 PCIF1Q9H4Z3 704 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 IL23AQ9NPF7 189 aa15.17■□□□□ 0.02
PHACTR4-203ENST00000463428 ANKFY1Q9P2R3 1169 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms