RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 SMARCC2Q8TAQ2 1214 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 IRF7Q92985 503 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
C9orf3-211ENST00000463372 SPAARA0A1B0GVQ0 90 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 NRP1O14786 923 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 XYLBO75191 536 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 AKAP3O75969 853 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 HNRNPA1P09651 372 aaKnown RBP eCLIP15.22■□□□□ 0.03
C9orf3-211ENST00000463372 SKIP12755 728 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 ZNF484Q5JVG2 852 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 LIN9Q5TKA1 542 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 ELSPBP1Q96BH3 223 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 MTMR8Q96EF0 704 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 GPATCH3Q96I76 525 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.22■□□□□ 0.03
C9orf3-211ENST00000463372 AKT3Q9Y243 479 aa15.22■□□□□ 0.03
C9orf3-211ENST00000463372 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 KHNYNO15037 678 aaKnown RBP15.21■□□□□ 0.03
C9orf3-211ENST00000463372 ATXN7O15265 892 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-211ENST00000463372 B4GALT3O60512 393 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 OFD1O75665 1012 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 PCP11498 1178 aaKnown RBP15.21■□□□□ 0.03
C9orf3-211ENST00000463372 CCNE1P24864 410 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 ACTR2P61160 394 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 DSG1Q02413 1049 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 GRM2Q14416 872 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 ELF2Q15723 593 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 PPM1LQ5SGD2 360 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 LILRA6Q6PI73 481 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 IQCA1Q86XH1 822 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 MIER1Q8N108 512 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 ING5Q8WYH8 240 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 ESR2Q92731 530 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 CUL5Q93034 780 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 SCLT1Q96NL6 688 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 MAP7D2Q96T17 732 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 TRMT61BQ9BVS5 477 aaKnown RBP15.21■□□□□ 0.03
C9orf3-211ENST00000463372 RBM12Q9NTZ6 932 aaKnown RBP15.21■□□□□ 0.03
C9orf3-211ENST00000463372 KCNH3Q9ULD8 1083 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 ATG2BQ96BY7 2078 aa15.21■□□□□ 0.03
C9orf3-211ENST00000463372 PLXNB3Q9ULL4 1909 aa15.21■□□□□ 0.02
C9orf3-211ENST00000463372 PI4KAP42356 2102 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 THADAQ6YHU6 1953 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 CCDC163A0A0D9SF12 145 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 CDX4O14627 284 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-211ENST00000463372 CCL16O15467 120 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 DDHD2O94830 711 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 RHOBTB1O94844 696 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 ITGB5P18084 799 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 PLK5Q496M5 336 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 VPS53Q5VIR6 699 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 TWF2Q6IBS0 349 aaKnown RBP15.2■□□□□ 0.02
C9orf3-211ENST00000463372 TANGO2Q6ICL3 276 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 Q6ZS52 159 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 TMEFF1Q8IYR6 380 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 STAG2Q8N3U4 1231 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 ZNF843Q8N446 348 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 JADE2Q9NQC1 790 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 CHST12Q9NRB3 414 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 GDE1Q9NZC3 331 aa15.2■□□□□ 0.02
C9orf3-211ENST00000463372 MYO9AB2RTY4 2548 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 ABCA7Q8IZY2 2146 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 BCLAF3A2AJT9 711 aaKnown RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 BACH1O14867 736 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 MAFGO15525 162 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 ANP32CO43423 234 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 C22orf31O95567 290 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 NTRK1P04629 796 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 FGFR4P22455 802 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 PXNP49023 591 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 CREMQ03060 361 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 ALX1Q15699 326 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 PABPC1LQ4VXU2 614 aaKnown RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 DGKKQ5KSL6 1271 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 FAM160B1Q5W0V3 765 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 MDM1Q8TC05 714 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 SDF4Q9BRK5 362 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 ZNF334Q9HCZ1 680 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 TRPV5Q9NQA5 729 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 C2orf42Q9NWW7 574 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 FNIP2Q9P278 1114 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 KANSL3Q9P2N6 904 aa15.19■□□□□ 0.02
C9orf3-211ENST00000463372 PRG3Q9Y2Y8 225 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 MRPS23Q9Y3D9 190 aaKnown RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 TDRD15B5MCY1 1934 aaKnown RBP15.19■□□□□ 0.02
C9orf3-211ENST00000463372 COL6A6A6NMZ7 2263 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 SPTAN1Q13813 2472 aaKnown RBP15.18■□□□□ 0.02
C9orf3-211ENST00000463372 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 HOXC13P31276 330 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 HAND2P61296 217 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 PGBD4Q96DM1 585 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 PIGSQ96S52 555 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 TRAIPQ9BWF2 469 aa15.18■□□□□ 0.02
C9orf3-211ENST00000463372 FGAP02671 866 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms