RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PLCB3Q01970 1234 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 ARSHQ5FYA8 562 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 AGMOQ6ZNB7 445 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 LRRC55Q6ZSA7 311 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 CLIC6Q96NY7 704 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 CIZ1Q9ULV3 898 aaPredicted RBP14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 TNFSF13BQ9Y275 285 aa14.39□□□□□ -0.11
R3HDM1-213ENST00000463230 B4GALT5O43286 388 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 MCM6Q14566 821 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 KLHL23Q8NBE8 558 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 RNF25Q96BH1 459 aaPredicted RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 PYM1Q9BRP8 204 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 TMEM175Q9BSA9 504 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 EIF2AQ9BY44 585 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 MRPL4Q9BYD3 311 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 NSUN3Q9H649 340 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 TFIP11Q9UBB9 837 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 COG5Q9UP83 839 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 LAMA2P24043 3122 aaKnown RBP14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 ITGB1P05556 798 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 TMEM132AQ24JP5 1023 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 KCNT2Q6UVM3 1135 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 USP49Q70CQ1 688 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 SPPL3Q8TCT6 385 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 LPPQ93052 612 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 PPP2R3CQ969Q6 453 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 REEP2Q9BRK0 252 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 LRRC27Q9C0I9 530 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 TBC1D13Q9NVG8 400 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 SPG21Q9NZD8 308 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 RCOR1Q9UKL0 485 aa14.38□□□□□ -0.11
R3HDM1-213ENST00000463230 PRRC2BQ5JSZ5 2229 aaKnown RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 GRM6O15303 877 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 TBCAO75347 108 aaKnown RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 FAM13AO94988 1023 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 NPTXRO95502 500 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 KRT18P05783 430 aaKnown RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 NCKAP1LP55160 1127 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 STRN3Q13033 797 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 PKP1Q13835 747 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 SV2BQ7L1I2 683 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 THNSL1Q8IYQ7 743 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 LRRC15Q8TF66 581 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 MAGEF1Q9HAY2 307 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 PARVGQ9HBI0 331 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 SEL1LQ9UBV2 794 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 FGF18O76093 207 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 MAPTP10636 758 aaKnown RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 STAT6P42226 847 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 KRT17Q04695 432 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 GIT2Q14161 759 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 NT5DC1Q5TFE4 455 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 FOXD4L5Q5VV16 416 aaPredicted RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 ZPBP2Q6X784 338 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 SLC39A11Q8N1S5 342 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 TMEM161BQ8NDZ6 487 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 FOXD4L4Q8WXT5 416 aaPredicted RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 MRPS27Q92552 414 aaKnown RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 KIFC3Q9BVG8 833 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 THEGQ9P2T0 379 aa14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 PUF60Q9UHX1 559 aaKnown RBP14.37□□□□□ -0.11
R3HDM1-213ENST00000463230 SZT2Q5T011 3432 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 ATG2AQ2TAZ0 1938 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 GAP43P17677 238 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 ALDH7A1P49419 539 aaKnown RBP14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 RNASELQ05823 741 aaKnown RBP14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 COL19A1Q14993 1142 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 ATXN2LQ8WWM7 1075 aaKnown RBP14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 ACO2Q99798 780 aaKnown RBP14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 ST6GALNAC4Q9H4F1 302 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 PLXNA4Q9HCM2 1894 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 TRANK1O15050 2925 aa14.36□□□□□ -0.11
R3HDM1-213ENST00000463230 SLC16A4O15374 487 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 BCAR1P56945 870 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 KRT85P78386 507 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 AAK1Q2M2I8 961 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 AXDND1Q5T1B0 1012 aaPredicted RBP14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 MICALL1Q8N3F8 863 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 HVCN1Q96D96 273 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 NXF3Q9H4D5 531 aaKnown RBP14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 INPP5FQ9Y2H2 1132 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 ZDHHC9Q9Y397 364 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 CHD7Q9P2D1 2997 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 ARL5CA6NH57 179 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 MEIS3P2A8K0S8 358 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 FSCN2O14926 492 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 MCF2P10911 925 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 PROZP22891 400 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 NUCB2P80303 420 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 DNM1Q05193 864 aaKnown RBP14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 CCDC85BQ15834 202 aaPredicted RBP14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 TAS1R3Q7RTX0 852 aa14.35□□□□□ -0.11
R3HDM1-213ENST00000463230 FAM193BQ96PV7 902 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms