RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 SCRN1Q12765 414 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 MXD4Q14582 209 aaPredicted RBP22.05■■□□□ 1.12
VARS-221ENST00000463184 ELMSAN1Q6PJG2 1045 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 COLGALT2Q8IYK4 626 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 SLFN12Q8IYM2 578 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 CCDC51Q96ER9 411 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 DYDC2Q96IM9 177 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 RPS6KC1Q96S38 1066 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 HERC2P3Q9BVR0 1158 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 BMP2KQ9NSY1 1161 aaPredicted RBP22.05■■□□□ 1.12
VARS-221ENST00000463184 IPPQ9Y573 584 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 STK36Q9NRP7 1315 aa22.05■■□□□ 1.12
VARS-221ENST00000463184 C2CD2LO14523 706 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 ADH1AP07327 375 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 AK2P54819 239 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 PTENP60484 403 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 CTTNQ14247 550 aaKnown RBP22.04■■□□□ 1.12
VARS-221ENST00000463184 NCAPH2Q6IBW4 605 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 NOTUMQ6P988 496 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 CYP26C1Q6V0L0 522 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 RHOBTB2Q9BYZ6 727 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 KCNK12Q9HB15 430 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 MARCH5Q9NX47 278 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 IGSF9Q9P2J2 1179 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 DUSP12Q9UNI6 340 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 PRG3Q9Y2Y8 225 aaPredicted RBP22.04■■□□□ 1.12
VARS-221ENST00000463184 DENND4AQ7Z401 1863 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 CFAP54Q96N23 3096 aa22.04■■□□□ 1.12
VARS-221ENST00000463184 ZFHX2Q9C0A1 2572 aaPredicted RBP22.03■■□□□ 1.12
VARS-221ENST00000463184 ARL5CA6NH57 179 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 OR1G1P47890 313 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 POU5F1BQ06416 359 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 SPIRE1Q08AE8 756 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 TFDP1Q14186 410 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 POTEDQ86YR6 584 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 TPH2Q8IWU9 490 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 RNF168Q8IYW5 571 aaPredicted RBP22.03■■□□□ 1.12
VARS-221ENST00000463184 OXER1Q8TDS5 423 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 GAD1Q99259 594 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 EIF2AQ9BY44 585 aaKnown RBP22.03■■□□□ 1.12
VARS-221ENST00000463184 CSRNP2Q9H175 543 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 MAN1C1Q9NR34 630 aa22.03■■□□□ 1.12
VARS-221ENST00000463184 ZBTB39O15060 712 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 TEX28O15482 410 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 TSPAN1O60635 241 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 NR1I2O75469 434 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 SLITRK3O94933 977 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 EFEMP2O95967 443 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 GLUD2P49448 558 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 CYP4A11Q02928 519 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 DSC1Q08554 894 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 KIAA0319Q5VV43 1072 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 TAS1R1Q7RTX1 841 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 IFNLR1Q8IU57 520 aaPredicted RBP22.02■■□□□ 1.12
VARS-221ENST00000463184 FLCNQ8NFG4 579 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 STAMQ92783 540 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 RNF39Q9H2S5 420 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 RXFP1Q9HBX9 757 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 XPNPEP1Q9NQW7 623 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 PLXNA3P51805 1871 aa22.02■■□□□ 1.12
VARS-221ENST00000463184 CCDC195A0A1B0GUA6 201 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 INO80B-WBP1J3KQ70 363 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 GLUD1P00367 558 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 C1RP00736 705 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 MLH1P40692 756 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 DSG1Q02413 1049 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 C8orf34Q49A92 452 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 CWF19L1Q69YN2 538 aaKnown RBP22.01■■□□□ 1.11
VARS-221ENST00000463184 HACE1Q8IYU2 909 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 HDAC7Q8WUI4 952 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 CPB2Q96IY4 423 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 SNX27Q96L92 541 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 RTP3Q9BQQ7 232 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 WDR6Q9NNW5 1121 aaKnown RBP22.01■■□□□ 1.11
VARS-221ENST00000463184 GJB4Q9NTQ9 266 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 FBXL21Q9UKT6 434 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 GIT1Q9Y2X7 761 aa22.01■■□□□ 1.11
VARS-221ENST00000463184 MYO15AQ9UKN7 3530 aa22■■□□□ 1.11
VARS-221ENST00000463184 PFKFB2O60825 505 aa22■■□□□ 1.11
VARS-221ENST00000463184 LYPLA2O95372 231 aa22■■□□□ 1.11
VARS-221ENST00000463184 NPR3P17342 541 aa22■■□□□ 1.11
VARS-221ENST00000463184 AOC1P19801 751 aa22■■□□□ 1.11
VARS-221ENST00000463184 SCNN1GP51170 649 aa22■■□□□ 1.11
VARS-221ENST00000463184 EARS2Q5JPH6 523 aaKnown RBP22■■□□□ 1.11
VARS-221ENST00000463184 ASCL5Q7RTU5 278 aa22■■□□□ 1.11
VARS-221ENST00000463184 WASF1Q92558 559 aa22■■□□□ 1.11
VARS-221ENST00000463184 EIF2AK1Q9BQI3 630 aaKnown RBP22■■□□□ 1.11
VARS-221ENST00000463184 COLEC11Q9BWP8 271 aa22■■□□□ 1.11
VARS-221ENST00000463184 TRIM6Q9C030 488 aaPredicted RBP22■■□□□ 1.11
VARS-221ENST00000463184 ANKEF1Q9NU02 776 aa22■■□□□ 1.11
VARS-221ENST00000463184 MIOSQ9NXC5 875 aa22■■□□□ 1.11
VARS-221ENST00000463184 HES2Q9Y543 173 aa22■■□□□ 1.11
VARS-221ENST00000463184 PTPRZ1P23471 2315 aaPredicted RBP21.99■■□□□ 1.11
VARS-221ENST00000463184 PRR23AA6NEV1 266 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 DGAT1O75907 488 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 GPR65Q8IYL9 337 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 ZFP42Q96MM3 310 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 HSD17B14Q9BPX1 270 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 NFKBIZQ9BYH8 718 aa21.99■■□□□ 1.11
VARS-221ENST00000463184 PLEKHA4Q9H4M7 779 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms