RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 SSTR3P32745 418 aaPredicted RBP14.46□□□□□ -0.09
HDAC1-203ENST00000463172 PBX3P40426 434 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 ERVFC1P60507 584 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 DMP1Q13316 513 aaPredicted RBP14.46□□□□□ -0.09
HDAC1-203ENST00000463172 SMAD4Q13485 552 aaKnown RBP14.46□□□□□ -0.09
HDAC1-203ENST00000463172 AMHR2Q16671 573 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 DUSP6Q16828 381 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 ADGRD2Q7Z7M1 963 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 DDX53Q86TM3 631 aaKnown RBP14.46□□□□□ -0.09
HDAC1-203ENST00000463172 RASSF8Q8NHQ8 419 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 IGSF21Q96ID5 467 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 RPS6KC1Q96S38 1066 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 APOL6Q9BWW8 343 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 EIF2AQ9BY44 585 aaKnown RBP14.46□□□□□ -0.09
HDAC1-203ENST00000463172 FZD8Q9H461 694 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 NRDE2Q9H7Z3 1164 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 C17orf75Q9HAS0 396 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 KCND2Q9NZV8 630 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 FAN1Q9Y2M0 1017 aa14.46□□□□□ -0.09
HDAC1-203ENST00000463172 ARL5CA6NH57 179 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 NT5C1B-RDH14C9J2C7 533 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 E9PMD0 336 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 K7ELQ4 463 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-203ENST00000463172 K7ERI5 159 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 ACKR2O00590 384 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 NPTXRO95502 500 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 POMCP01189 267 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC1-203ENST00000463172 GALTP07902 379 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 IL9P15248 144 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 LIG1P18858 919 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 GTF2F1P35269 517 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC1-203ENST00000463172 UBA7P41226 1012 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 ECM1Q16610 540 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 DCAF4L1Q3SXM0 396 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 FAM178BQ8IXR5 827 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 VPS52Q8N1B4 723 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 SMG8Q8ND04 991 aaKnown RBP14.45□□□□□ -0.1
HDAC1-203ENST00000463172 CASP10Q92851 521 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 NECAB3Q96P71 396 aaPredicted RBP14.45□□□□□ -0.1
HDAC1-203ENST00000463172 PARP2Q9UGN5 583 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 SSX2IPQ9Y2D8 614 aa14.45□□□□□ -0.1
HDAC1-203ENST00000463172 RBM19Q9Y4C8 960 aaKnown RBP14.45□□□□□ -0.1
HDAC1-203ENST00000463172 CCDC169A6NNP5 214 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 MEIS3P2A8K0S8 358 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 PP2D1A8MPX8 630 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 PER2O15055 1255 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 INPPL1O15357 1258 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 B4GALT5O43286 388 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 CXCL14O95715 111 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 LONP1P36776 959 aaKnown RBP14.44□□□□□ -0.1
HDAC1-203ENST00000463172 LTBRP36941 435 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 MLH1P40692 756 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 SLC11A1P49279 550 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 SMTNP53814 917 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 COASYQ13057 564 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 CLUL1Q15846 466 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 IL17AQ16552 155 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 HYIQ5T013 277 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 CABP7Q86V35 215 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 PPFIBP1Q86W92 1011 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 GJD3Q8N144 294 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 MRPL43Q8N983 215 aaKnown RBP14.44□□□□□ -0.1
HDAC1-203ENST00000463172 GAD1Q99259 594 aa14.44□□□□□ -0.1
HDAC1-203ENST00000463172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-203ENST00000463172 H0YCG3 227 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 LINC01565O15544 149 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 MBTPS2O43462 519 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 TBX10O75333 385 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 HSP90AA1P07900 732 aaKnown RBP14.43□□□□□ -0.1
HDAC1-203ENST00000463172 CTSAP10619 480 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
HDAC1-203ENST00000463172 HOXB8P17481 243 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-203ENST00000463172 GUCY2CP25092 1073 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 CDC25AP30304 524 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 OR1G1P47890 313 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 PEX3P56589 373 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 GRIK3Q13003 919 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 SMAD2Q15796 467 aaKnown RBP14.43□□□□□ -0.1
HDAC1-203ENST00000463172 TPRNQ4KMQ1 711 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 RINT1Q6NUQ1 792 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 ELMSAN1Q6PJG2 1045 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 ZNF280BQ86YH2 543 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 ADHFE1Q8IWW8 467 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 BSNDQ8WZ55 320 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 COLEC11Q9BWP8 271 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 C1QTNF1Q9BXJ1 281 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 EMILIN2Q9BXX0 1053 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 NXF3Q9H4D5 531 aaKnown RBP14.43□□□□□ -0.1
HDAC1-203ENST00000463172 KMT5AQ9NQR1 393 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 DNAJB4Q9UDY4 337 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 HES2Q9Y543 173 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 PCDHGC5Q9Y5F6 944 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 IRAK3Q9Y616 596 aa14.43□□□□□ -0.1
HDAC1-203ENST00000463172 C2orf71A6NGG8 1288 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 HIDE1A8MVS5 230 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 NRP1O14786 923 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 HIP1RO75146 1068 aa14.42□□□□□ -0.1
HDAC1-203ENST00000463172 DDHD2O94830 711 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms