RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PRMT1Q99873 361 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC77Q9BR77 488 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 WDR11Q9BZH6 1224 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TRIM7Q9C029 511 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 GPR88Q9GZN0 384 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TMX4Q9H1E5 349 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 EPB41L4BQ9H329 900 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TMEM206Q9H813 350 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ECT2Q9H8V3 914 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ERVK-5Q9HDB9 667 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 UBE2TQ9NPD8 197 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 DDX4Q9NQI0 724 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 BATF3Q9NR55 127 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 DMAC2Q9NW81 257 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 NKIRAS1Q9NYS0 192 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 NOP53Q9NZM5 478 aaKnown RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 TMOD4Q9NZQ9 345 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 WHRNQ9P202 907 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 UVRAGQ9P2Y5 699 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ASIC3Q9UHC3 531 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 SUFUQ9UMX1 484 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ARL2BPQ9Y2Y0 163 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 USP15Q9Y4E8 981 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 CEP83Q9Y592 693 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 ALG6Q9Y672 507 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 EMSYQ7Z589 1322 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 PIK3CDO00329 1044 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 FOXN3O00409 490 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 EML1O00423 815 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 OPLAHO14841 1288 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 PMM2O15305 246 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 THAP12O43422 761 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 CHMP2AO43633 222 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SNX3O60493 162 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SORBS3O60504 671 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 HIP1RO75146 1068 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 LRRN2O75325 713 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 WFS1O76024 890 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 GAS8O95995 478 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 NDUFB10O96000 172 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 CYP1A2P05177 515 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 CLTAP09496 248 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 POLR2MP0CAP2 368 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 POTEJP0CG39 1038 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 DLATP10515 647 aaKnown RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 MAPTP10636 758 aaKnown RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 IBSPP21815 317 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 COMTP21964 271 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 HOXA10P31260 410 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 PDE6BP35913 854 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SKIV2L2P42285 1042 aaKnown RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SLCO1A2P46721 670 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 MXI1P50539 228 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 VAMP7P51809 220 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SLC8A3P57103 927 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SNAP25P60880 206 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 COPS2P61201 443 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 NCALDP61601 193 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SNRPFP62306 86 aaKnown RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 IFI35P80217 286 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ATP11AP98196 1134 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 IL9RQ01113 521 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 CENPCQ03188 943 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 KRT17Q04695 432 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 MYO1EQ12965 1108 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 STRN3Q13033 797 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 PPP2R5CQ13362 524 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 CAMK2BQ13554 666 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 AUHQ13825 339 aaKnown RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 PTK6Q13882 451 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 RASA3Q14644 834 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 RRP1BQ14684 758 aaKnown RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 MFSD10Q14728 455 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 COG2Q14746 738 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 NAA25Q14CX7 972 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 TNIP1Q15025 636 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SETDB1Q15047 1291 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 VPS72Q15906 364 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ABCB5Q2M3G0 1257 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SPRED3Q2MJR0 410 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ZC2HC1CQ53FD0 456 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SGO2Q562F6 1265 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 TLDC1Q6P9B6 456 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 HHIPL2Q6UWX4 724 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 PPP1R21Q6ZMI0 780 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 FAM196AQ6ZSG2 479 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ARHGEF18Q6ZSZ5 1173 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 MIGA2Q7L4E1 593 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ZNF720Q7Z2F6 126 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 USP37Q86T82 979 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 TBC1D1Q86TI0 1168 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SLC51AQ86UW1 340 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ARHGEF19Q8IW93 802 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 C12orf56Q8IXR9 622 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SP8Q8IXZ3 490 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 RIBC1Q8N443 379 aaPredicted RBP3.77□□□□□ -1.81
COL8A1-204ENST00000462604 ANKRD42Q8N9B4 389 aa3.77□□□□□ -1.81
COL8A1-204ENST00000462604 SLC17A8Q8NDX2 589 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms