RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ANGPTL2Q9UKU9 493 aa17.17■□□□□ 0.34
APP-211ENST00000462267 ZMYND10O75800 440 aa17.16■□□□□ 0.34
APP-211ENST00000462267 POMCP01189 267 aa17.16■□□□□ 0.34
APP-211ENST00000462267 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
APP-211ENST00000462267 LILRA6Q6PI73 481 aa17.16■□□□□ 0.34
APP-211ENST00000462267 TSSK4Q6SA08 328 aa17.16■□□□□ 0.34
APP-211ENST00000462267 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
APP-211ENST00000462267 DDX1Q92499 740 aaKnown RBP17.16■□□□□ 0.34
APP-211ENST00000462267 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
APP-211ENST00000462267 BARHL2Q9NY43 387 aa17.16■□□□□ 0.34
APP-211ENST00000462267 PRG3Q9Y2Y8 225 aaPredicted RBP17.16■□□□□ 0.34
APP-211ENST00000462267 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.16■□□□□ 0.34
APP-211ENST00000462267 IGKV6-21A0A0C4DH24 114 aa17.15■□□□□ 0.34
APP-211ENST00000462267 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.15■□□□□ 0.34
APP-211ENST00000462267 CD72P21854 359 aa17.15■□□□□ 0.34
APP-211ENST00000462267 NRLP54845 237 aa17.15■□□□□ 0.34
APP-211ENST00000462267 JAKMIP3Q5VZ66 844 aa17.15■□□□□ 0.34
APP-211ENST00000462267 MICU3Q86XE3 530 aa17.15■□□□□ 0.34
APP-211ENST00000462267 COLGALT2Q8IYK4 626 aa17.15■□□□□ 0.34
APP-211ENST00000462267 CELF5Q8N6W0 485 aaKnown RBP17.15■□□□□ 0.34
APP-211ENST00000462267 NIFKQ9BYG3 293 aaKnown RBP17.15■□□□□ 0.34
APP-211ENST00000462267 UBN1Q9NPG3 1134 aa17.15■□□□□ 0.34
APP-211ENST00000462267 CHST7Q9NS84 486 aa17.15■□□□□ 0.34
APP-211ENST00000462267 AGPAT5Q9NUQ2 364 aa17.15■□□□□ 0.34
APP-211ENST00000462267 FNIP2Q9P278 1114 aa17.15■□□□□ 0.34
APP-211ENST00000462267 RALYQ9UKM9 306 aaKnown RBP17.15■□□□□ 0.34
APP-211ENST00000462267 MRPS17Q9Y2R5 130 aaKnown RBP17.15■□□□□ 0.34
APP-211ENST00000462267 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
APP-211ENST00000462267 RETP07949 1114 aa17.14■□□□□ 0.33
APP-211ENST00000462267 TARSP26639 723 aaKnown RBP17.14■□□□□ 0.33
APP-211ENST00000462267 OR1G1P47890 313 aa17.14■□□□□ 0.33
APP-211ENST00000462267 CREMQ03060 361 aa17.14■□□□□ 0.33
APP-211ENST00000462267 PRR16Q569H4 304 aa17.14■□□□□ 0.33
APP-211ENST00000462267 GRASPQ7Z6J2 395 aaPredicted RBP17.14■□□□□ 0.33
APP-211ENST00000462267 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
APP-211ENST00000462267 FGF13Q92913 245 aa17.14■□□□□ 0.33
APP-211ENST00000462267 MAP4K1Q92918 833 aa17.14■□□□□ 0.33
APP-211ENST00000462267 RBM28Q9NW13 759 aaKnown RBP17.14■□□□□ 0.33
APP-211ENST00000462267 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.33
APP-211ENST00000462267 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
APP-211ENST00000462267 CNOT1A5YKK6 2376 aaKnown RBP17.14■□□□□ 0.33
APP-211ENST00000462267 MYH15Q9Y2K3 1946 aa17.13■□□□□ 0.33
APP-211ENST00000462267 FOXD2O60548 495 aaPredicted RBP17.13■□□□□ 0.33
APP-211ENST00000462267 NR1I2O75469 434 aa17.13■□□□□ 0.33
APP-211ENST00000462267 SFNP31947 248 aa17.13■□□□□ 0.33
APP-211ENST00000462267 UGCGQ16739 394 aa17.13■□□□□ 0.33
APP-211ENST00000462267 ZNF852Q6ZMS4 543 aa17.13■□□□□ 0.33
APP-211ENST00000462267 SYNE3Q6ZMZ3 975 aa17.13■□□□□ 0.33
APP-211ENST00000462267 MAMSTRQ6ZN01 415 aa17.13■□□□□ 0.33
APP-211ENST00000462267 SGMS1Q86VZ5 419 aa17.13■□□□□ 0.33
APP-211ENST00000462267 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
APP-211ENST00000462267 MBOAT7Q96N66 472 aa17.13■□□□□ 0.33
APP-211ENST00000462267 CEP89Q96ST8 783 aa17.13■□□□□ 0.33
APP-211ENST00000462267 PHF20Q9BVI0 1012 aa17.13■□□□□ 0.33
APP-211ENST00000462267 FAM217BQ9NTX9 383 aaPredicted RBP17.13■□□□□ 0.33
APP-211ENST00000462267 MTCL1Q9Y4B5 1905 aaKnown RBP17.13■□□□□ 0.33
APP-211ENST00000462267 HNRNPA1P09651 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
APP-211ENST00000462267 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
APP-211ENST00000462267 CHMLP26374 656 aa17.12■□□□□ 0.33
APP-211ENST00000462267 CIITAP33076 1130 aa17.12■□□□□ 0.33
APP-211ENST00000462267 JAK3P52333 1124 aa17.12■□□□□ 0.33
APP-211ENST00000462267 SHC2P98077 582 aa17.12■□□□□ 0.33
APP-211ENST00000462267 DSC1Q08554 894 aa17.12■□□□□ 0.33
APP-211ENST00000462267 ADCY1Q08828 1119 aa17.12■□□□□ 0.33
APP-211ENST00000462267 FUT2Q10981 343 aa17.12■□□□□ 0.33
APP-211ENST00000462267 MTAPQ13126 283 aa17.12■□□□□ 0.33
APP-211ENST00000462267 AAMPQ13685 434 aa17.12■□□□□ 0.33
APP-211ENST00000462267 PPP2R5DQ14738 602 aa17.12■□□□□ 0.33
APP-211ENST00000462267 CSRP2Q16527 193 aa17.12■□□□□ 0.33
APP-211ENST00000462267 USP41Q3LFD5 358 aa17.12■□□□□ 0.33
APP-211ENST00000462267 MTERF2Q49AM1 385 aa17.12■□□□□ 0.33
APP-211ENST00000462267 XKR3Q5GH77 459 aa17.12■□□□□ 0.33
APP-211ENST00000462267 TPRG1Q6ZUI0 275 aa17.12■□□□□ 0.33
APP-211ENST00000462267 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
APP-211ENST00000462267 COLEC11Q9BWP8 271 aa17.12■□□□□ 0.33
APP-211ENST00000462267 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
APP-211ENST00000462267 SEMA4GQ9NTN9 838 aa17.12■□□□□ 0.33
APP-211ENST00000462267 SEPT9Q9UHD8 586 aaPredicted RBP17.12■□□□□ 0.33
APP-211ENST00000462267 COL4A3Q01955 1670 aa17.12■□□□□ 0.33
APP-211ENST00000462267 TDGF1P13385 188 aa17.11■□□□□ 0.33
APP-211ENST00000462267 PMLP29590 882 aa17.11■□□□□ 0.33
APP-211ENST00000462267 FZD5Q13467 585 aa17.11■□□□□ 0.33
APP-211ENST00000462267 LPAL2Q16609 132 aa17.11■□□□□ 0.33
APP-211ENST00000462267 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
APP-211ENST00000462267 PRR23CQ6ZRP0 262 aa17.11■□□□□ 0.33
APP-211ENST00000462267 RIT2Q99578 217 aa17.11■□□□□ 0.33
APP-211ENST00000462267 KXD1Q9BQD3 176 aa17.11■□□□□ 0.33
APP-211ENST00000462267 IER2Q9BTL4 223 aa17.11■□□□□ 0.33
APP-211ENST00000462267 SH2B1Q9NRF2 756 aaPredicted RBP17.11■□□□□ 0.33
APP-211ENST00000462267 RBM8AQ9Y5S9 174 aaKnown RBP17.11■□□□□ 0.33
APP-211ENST00000462267 SGSM2O43147 1006 aa17.1■□□□□ 0.33
APP-211ENST00000462267 MAFO75444 373 aaPredicted RBP17.1■□□□□ 0.33
APP-211ENST00000462267 ITGA4P13612 1032 aa17.1■□□□□ 0.33
APP-211ENST00000462267 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
APP-211ENST00000462267 NTHL1P78549 312 aa17.1■□□□□ 0.33
APP-211ENST00000462267 GLYCTKQ8IVS8 523 aa17.1■□□□□ 0.33
APP-211ENST00000462267 KSR1Q8IVT5 923 aa17.1■□□□□ 0.33
APP-211ENST00000462267 RDM1Q8NG50 284 aa17.1■□□□□ 0.33
APP-211ENST00000462267 LENG9Q96B70 501 aa17.1■□□□□ 0.33
APP-211ENST00000462267 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms