RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 BPIP17213 487 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 FKBP1BP68106 108 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 NFKB2Q00653 900 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 AMPD3Q01432 767 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 TARBP2Q15633 366 aaKnown RBP6.21□□□□□ -1.42
COPS3-204ENST00000462236 SEPT7Q16181 437 aaKnown RBP6.21□□□□□ -1.42
COPS3-204ENST00000462236 PTRH1Q86Y79 214 aaKnown RBP6.21□□□□□ -1.42
COPS3-204ENST00000462236 CISD2Q8N5K1 135 aaKnown RBP6.21□□□□□ -1.42
COPS3-204ENST00000462236 SH3RF2Q8TEC5 729 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 TTC1Q99614 292 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 EPB41L4BQ9H329 900 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 IFT22Q9H7X7 185 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 MGAMO43451 1857 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 TEX51A0A1B0GUA7 166 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 SLC27A2O14975 620 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 HTATSF1O43719 755 aaKnown RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 HIP1RO75146 1068 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 SEMA7AO75326 666 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 EYA4O95677 639 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 HSPA5P11021 654 aaKnown RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 TAL1P17542 331 aaPredicted RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 KRT15P19012 456 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 RPS12P25398 132 aaKnown RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 PMLP29590 882 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 LSSP48449 732 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 HERVK_113P62684 666 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 IGBP1P78318 339 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 TUSC3Q13454 348 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 TBC1D10BQ4KMP7 808 aaPredicted RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 PARP10Q53GL7 1025 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 CC2D1AQ6P1N0 951 aaPredicted RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 NOSTRINQ8IVI9 506 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 FAM126BQ8IXS8 530 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 ANKRD13AQ8IZ07 590 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 DLG3Q92796 817 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 USP7Q93009 1102 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 R3HDMLQ9H3Y0 253 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 APOBEC2Q9Y235 224 aaKnown RBP6.2□□□□□ -1.42
COPS3-204ENST00000462236 ATP8A1Q9Y2Q0 1164 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 SIT1Q9Y3P8 196 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 B3GALT1Q9Y5Z6 326 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 IRS2Q9Y4H2 1338 aa6.2□□□□□ -1.42
COPS3-204ENST00000462236 A0A1B0GUL6 1792 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 TCERG1O14776 1098 aaKnown RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 ZBTB48P10074 688 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 NCAM1P13591 858 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 POU3F3P20264 500 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 SDHBP21912 280 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 GPTP24298 496 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 VIPR1P32241 457 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 ZNF280AP59817 542 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 ANAPC15P60006 121 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 FAPQ12884 760 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 ZNF174Q15697 407 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 DPP8Q6V1X1 898 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 TMC6Q7Z403 805 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 PPP1R42Q7Z4L9 355 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 C11orf74Q86VG3 221 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 PASD1Q8IV76 773 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 EFHBQ8N7U6 833 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 ALG3Q92685 438 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 CDCA5Q96FF9 252 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 TOE1Q96GM8 510 aaKnown RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 POLR3GLQ9BT43 218 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 DCP1AQ9NPI6 582 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 ACSS2Q9NR19 701 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 KCNH7Q9NS40 1196 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 DTLQ9NZJ0 730 aa6.19□□□□□ -1.42
COPS3-204ENST00000462236 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 ASTN2O75129 1339 aaPredicted RBP6.19□□□□□ -1.42
COPS3-204ENST00000462236 CYP17A1P05093 508 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 ATP2A2P16615 1042 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 SDHAP31040 664 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 PRKAR2BP31323 418 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 EIF4A1P60842 406 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 SRSF3P84103 164 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 IRF9Q00978 393 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 GRAPQ13588 217 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 TAF7Q15545 349 aaPredicted RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 RNF219Q5W0B1 726 aaPredicted RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 ETV3LQ6ZN32 361 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 MCM10Q7L590 875 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 ZNF605Q86T29 641 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 ZC3H18Q86VM9 953 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 FBXO15Q8NCQ5 510 aaPredicted RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 GRAPLQ8TC17 118 aaPredicted RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 CLEC4DQ8WXI8 215 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 DCPSQ96C86 337 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 NSUN3Q9H649 340 aaKnown RBP6.18□□□□□ -1.42
COPS3-204ENST00000462236 SIRT5Q9NXA8 310 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 GGA3Q9NZ52 723 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 POLLQ9UGP5 575 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 HDAC9Q9UKV0 1011 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 SPO11Q9Y5K1 396 aa6.18□□□□□ -1.42
COPS3-204ENST00000462236 SPTBN5Q9NRC6 3674 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms