RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 FAM193BQ96PV7 902 aaPredicted RBP21■□□□□ 0.95
VARS-220ENST00000461874 VN1R3Q9BXE9 311 aa21■□□□□ 0.95
VARS-220ENST00000461874 UPF2Q9HAU5 1272 aaKnown RBP21■□□□□ 0.95
VARS-220ENST00000461874 LRWD1Q9UFC0 647 aa21■□□□□ 0.95
VARS-220ENST00000461874 KIF3AQ9Y496 699 aa21■□□□□ 0.95
VARS-220ENST00000461874 HES2Q9Y543 173 aa21■□□□□ 0.95
VARS-220ENST00000461874 PCDHB6Q9Y5E3 794 aa21■□□□□ 0.95
VARS-220ENST00000461874 IRAK3Q9Y616 596 aa21■□□□□ 0.95
VARS-220ENST00000461874 A0A1B0GUA9 196 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 ARHGEF35A5YM69 484 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 ARL5CA6NH57 179 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 LOC730098B7Z3J9 87 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 HOXB8P17481 243 aaPredicted RBP20.99■□□□□ 0.95
VARS-220ENST00000461874 CCT6AP40227 531 aaKnown RBP20.99■□□□□ 0.95
VARS-220ENST00000461874 GIT2Q14161 759 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 ECM1Q16610 540 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 CDCA2Q69YH5 1023 aaPredicted RBP20.99■□□□□ 0.95
VARS-220ENST00000461874 RNF135Q8IUD6 432 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 AUTS2Q8WXX7 1259 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 GAD1Q99259 594 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 PHF7Q9BWX1 381 aaPredicted RBP20.99■□□□□ 0.95
VARS-220ENST00000461874 FAN1Q9Y2M0 1017 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 HCFC2Q9Y5Z7 792 aa20.99■□□□□ 0.95
VARS-220ENST00000461874 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.98■□□□□ 0.95
VARS-220ENST00000461874 CD2BP2O95400 341 aaKnown RBP20.98■□□□□ 0.95
VARS-220ENST00000461874 CA8P35219 290 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 SLC27A1Q6PCB7 646 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 IGSF22Q8N9C0 903 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 BSNDQ8WZ55 320 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 PRIMPOLQ96LW4 560 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 TRIM6Q9C030 488 aaPredicted RBP20.98■□□□□ 0.95
VARS-220ENST00000461874 FZD8Q9H461 694 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 PRMT7Q9NVM4 692 aaPredicted RBP20.98■□□□□ 0.95
VARS-220ENST00000461874 STK39Q9UEW8 545 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 GIT1Q9Y2X7 761 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 STK24Q9Y6E0 443 aa20.98■□□□□ 0.95
VARS-220ENST00000461874 NRP1O14786 923 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 MLH1P40692 756 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 CBX2Q14781 532 aaPredicted RBP20.97■□□□□ 0.95
VARS-220ENST00000461874 FAM187BQ17R55 369 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 HERC4Q5GLZ8 1057 aaPredicted RBP20.97■□□□□ 0.95
VARS-220ENST00000461874 CDR2LQ86X02 465 aaPredicted RBP20.97■□□□□ 0.95
VARS-220ENST00000461874 ZBTB8OSQ8IWT0 167 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 COLGALT2Q8IYK4 626 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 HACE1Q8IYU2 909 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 ZFP42Q96MM3 310 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 APOL6Q9BWW8 343 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 APOL5Q9BWW9 433 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 RAB34Q9BZG1 259 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 C2orf40Q9H1Z8 148 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 NXF3Q9H4D5 531 aaKnown RBP20.97■□□□□ 0.95
VARS-220ENST00000461874 MIOSQ9NXC5 875 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 MUTYHQ9UIF7 546 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 KIAA1024Q9UPX6 916 aa20.97■□□□□ 0.95
VARS-220ENST00000461874 LAD1O00515 517 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 NPTXRO95502 500 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 DSC1Q08554 894 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 PTPN14Q15678 1187 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 TPRNQ4KMQ1 711 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 MCTP1Q6DN14 999 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 TMEM87AQ8NBN3 555 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 BHMT2Q9H2M3 363 aa20.96■□□□□ 0.95
VARS-220ENST00000461874 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.96■□□□□ 0.95
VARS-220ENST00000461874 PRR33A8MZF0 331 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 AKAP5P24588 427 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 PRPHP41219 470 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 NAMPTP43490 491 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 MCM2P49736 904 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 SCNN1GP51170 649 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 IL17AQ16552 155 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 GSTCDQ8NEC7 633 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 SNX29Q8TEQ0 813 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 SLC22A17Q8WUG5 538 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 RPGRIP1Q96KN7 1286 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 DDX19AQ9NUU7 478 aaKnown RBP20.95■□□□□ 0.94
VARS-220ENST00000461874 MARCH5Q9NX47 278 aa20.95■□□□□ 0.94
VARS-220ENST00000461874 PRG3Q9Y2Y8 225 aaPredicted RBP20.95■□□□□ 0.94
VARS-220ENST00000461874 TTLL13PA6NNM8 815 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 GJB2P29033 226 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 OR1G1P47890 313 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 PPP2R5AQ15172 486 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 MAPK6Q16659 721 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 RILPL1Q5EBL4 403 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 DEPTORQ8TB45 409 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 TBC1D32Q96NH3 1257 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 CCDC113Q9H0I3 377 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 ADAM7Q9H2U9 754 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 POLD4Q9HCU8 107 aa20.94■□□□□ 0.94
VARS-220ENST00000461874 ACKR2O00590 384 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 LILRB3O75022 631 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 SSBP05455 408 aaKnown RBP eCLIP20.93■□□□□ 0.94
VARS-220ENST00000461874 EPCAMP16422 314 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 ITIH3Q06033 890 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 PRPF4BQ13523 1007 aaKnown RBP20.93■□□□□ 0.94
VARS-220ENST00000461874 KRT79Q5XKE5 535 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 CES5AQ6NT32 575 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 DTHD1Q6ZMT9 781 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 PPFIBP1Q86W92 1011 aa20.93■□□□□ 0.94
VARS-220ENST00000461874 KIFAP3Q92845 792 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms