RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 PCDHB12Q9Y5F1 795 aa11.21□□□□□ -0.61
SPTAN1-204ENST00000461855 KIAA1671Q9BY89 1806 aa11.21□□□□□ -0.62
SPTAN1-204ENST00000461855 A0A087X0B3 334 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 SFI1A8K8P3 1242 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 K7ERI5 159 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 ABLIM1O14639 778 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 FSCN2O14926 492 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 N4BP3O15049 544 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 FGF18O76093 207 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 EFEMP2O95967 443 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 ITGA4P13612 1032 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 SCP2P22307 547 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 PROZP22891 400 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 NCKAP1LP55160 1127 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 DMP1Q13316 513 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 PRPF4BQ13523 1007 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 MCM6Q14566 821 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 CCDC85BQ15834 202 aaPredicted RBP11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 TIGD5Q53EQ6 642 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 RNF169Q8NCN4 708 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 SLC17A8Q8NDX2 589 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 POF1BQ8WVV4 589 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 ATXN2LQ8WWM7 1075 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 MRPS27Q92552 414 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 ZNF558Q96NG5 402 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 REEP2Q9BRK0 252 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 NRDE2Q9H7Z3 1164 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 PRDM6Q9NQX0 595 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 LARSQ9P2J5 1176 aaKnown RBP11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 CCDC39Q9UFE4 941 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 COG5Q9UP83 839 aa11.2□□□□□ -0.62
SPTAN1-204ENST00000461855 VCANP13611 3396 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 NPHP3-ACAD11A0A0J9YXS1 232 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 ARL5CA6NH57 179 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 B4GALT3O60512 393 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 CUTAO60888 179 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 DDHD2O94830 711 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 GALTP07902 379 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 MAPTP10636 758 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 IBSPP21815 317 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 PPM1AP35813 382 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 BCAR1P56945 870 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 DSC1Q08554 894 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 STK38Q15208 465 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 E2F4Q16254 413 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 CTC1Q2NKJ3 1217 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 EEF1DP3Q658K8 133 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 SHC4Q6S5L8 630 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 CDR2LQ86X02 465 aaPredicted RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 ZNF280BQ86YH2 543 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 SPRYD3Q8NCJ5 442 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 TMEM175Q9BSA9 504 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 ST6GALNAC4Q9H4F1 302 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 NSUN3Q9H649 340 aaKnown RBP11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 KMT5AQ9NQR1 393 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 CFAP45Q9UL16 551 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 USP20Q9Y2K6 914 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 HES2Q9Y543 173 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 MYH15Q9Y2K3 1946 aa11.19□□□□□ -0.62
SPTAN1-204ENST00000461855 CCDC169A6NNP5 214 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 SLC16A4O15374 487 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 NCK2O43639 380 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 NPTXRO95502 500 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 PIGRP01833 764 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 SSBP05455 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 IRS1P35568 1242 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 TXLNAP40222 546 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 SMTNP53814 917 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 ERVFC1P60507 584 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 DCAF4L1Q3SXM0 396 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 LONRF3Q496Y0 759 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 XKR4Q5GH76 650 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 TCEAL5Q5H9L2 206 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 RRAGBQ5VZM2 374 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 ZPBP2Q6X784 338 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 CCDC73Q6ZRK6 1079 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 TMEM173Q86WV6 379 aaPredicted RBP11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 COLGALT2Q8IYK4 626 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 HACE1Q8IYU2 909 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 PPM1EQ8WY54 764 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 GAD1Q99259 594 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 STRA6Q9BX79 667 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 MRPL4Q9BYD3 311 aaKnown RBP11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 PARVGQ9HBI0 331 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 THEGQ9P2T0 379 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 PCDHA7Q9UN72 937 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 MYO7AQ13402 2215 aa11.18□□□□□ -0.62
SPTAN1-204ENST00000461855 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms