RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TMEM169Q96HH4 297 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 TMEM175Q9BSA9 504 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 RSAD1Q9HA92 442 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 STK39Q9UEW8 545 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 USP15Q9Y4E8 981 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 A0A1B0GUA9 196 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 PRR33A8MZF0 331 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
BRCA1-207ENST00000461798 MED24O75448 989 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 DDHD2O94830 711 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ERLIN2O94905 339 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 CXCL14O95715 111 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ALDH2P05091 517 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 OR52Z1P0C646 297 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 CTSAP10619 480 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ATP2B1P20020 1258 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 TECP42680 631 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 SLC11A1P49279 550 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 RBM10P98175 930 aaKnown RBP10.17□□□□□ -0.78
BRCA1-207ENST00000461798 CAPSQ13938 189 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 PDIA5Q14554 519 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 RABEP1Q15276 862 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ZNF174Q15697 407 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 LONRF3Q496Y0 759 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 TTC38Q5R3I4 469 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 NOTUMQ6P988 496 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 SYCE2Q6PIF2 218 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 TMEM173Q86WV6 379 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ZNF280BQ86YH2 543 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 RNF135Q8IUD6 432 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 VPS52Q8N1B4 723 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 FAM184AQ8NB25 1140 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 MCPH1Q8NEM0 835 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ERMNQ8TAM6 284 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 URGCPQ8TCY9 931 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 CASP10Q92851 521 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 PHF7Q9BWX1 381 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-207ENST00000461798 ZBP1Q9H171 429 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 CSRNP2Q9H175 543 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 DNAJB4Q9UDY4 337 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 PLXNA4Q9HCM2 1894 aa10.17□□□□□ -0.78
BRCA1-207ENST00000461798 A0A087WWV3 80 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 INO80B-WBP1J3KQ70 363 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 B4GALT3O60512 393 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 LILRB3O75022 631 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 ZC3H11AO75152 810 aaKnown RBP eCLIP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 EFEMP2O95967 443 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 ITGA4P13612 1032 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 ARF4P18085 180 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 CYP11B2P19099 503 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 TOB1P50616 345 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 AFF1P51825 1210 aaKnown RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 RNASELQ05823 741 aaKnown RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 GSE1Q14687 1217 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 BCL7CQ8WUZ0 217 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 PRIMPOLQ96LW4 560 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 CCDC43Q96MW1 224 aaKnown RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 VN1R3Q9BXE9 311 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 EIF2AQ9BY44 585 aaKnown RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 POLR3FQ9H1D9 316 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 FZD8Q9H461 694 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 RAPGEFL1Q9UHV5 662 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 NOL7Q9UMY1 257 aaKnown RBP10.16□□□□□ -0.78
BRCA1-207ENST00000461798 INPP5FQ9Y2H2 1132 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 GIT1Q9Y2X7 761 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 IPPQ9Y573 584 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 HCFC2Q9Y5Z7 792 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
BRCA1-207ENST00000461798 ZMYM2Q9UBW7 1377 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 NRP1O14786 923 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
BRCA1-207ENST00000461798 ITIH3Q06033 890 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 DSC1Q08554 894 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 TPRNQ4KMQ1 711 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 CDCA2Q69YH5 1023 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-207ENST00000461798 PADI6Q6TGC4 694 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 COLGALT2Q8IYK4 626 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 IGSF22Q8N9C0 903 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 SLC22A17Q8WUG5 538 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 EDAQ92838 391 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 CPB2Q96IY4 423 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 ADAM7Q9H2U9 754 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 GPRC5CQ9NQ84 441 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 PRMT7Q9NVM4 692 aaPredicted RBP10.15□□□□□ -0.78
BRCA1-207ENST00000461798 MIOSQ9NXC5 875 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 FAN1Q9Y2M0 1017 aa10.15□□□□□ -0.78
BRCA1-207ENST00000461798 FAM86C2PA6NEL3 165 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 ARL5CA6NH57 179 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 LAD1O00515 517 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 B4GALT5O43286 388 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 C1RP00736 705 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 POMCP01189 267 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 PTGDRQ13258 359 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 PDAP1Q13442 181 aaKnown RBP10.14□□□□□ -0.79
BRCA1-207ENST00000461798 GNL2Q13823 731 aaKnown RBP10.14□□□□□ -0.79
BRCA1-207ENST00000461798 PTPN14Q15678 1187 aa10.14□□□□□ -0.79
BRCA1-207ENST00000461798 ECM1Q16610 540 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms