RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CWH43Q9H720 699 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 RSAD1Q9HA92 442 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 FAM13BQ9NYF5 915 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 ZDHHC9Q9Y397 364 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 IPPQ9Y573 584 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 TCHHQ07283 1943 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 MEIS3P2A8K0S8 358 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 H0YCG3 227 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 OFD1O75665 1012 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 LINC00271P0C7V0 271 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 NUCB2P80303 420 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 STRN3Q13033 797 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 GIT2Q14161 759 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 AGMOQ6ZNB7 445 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 DYMQ7RTS9 669 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 KLHL23Q8NBE8 558 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 SMG8Q8ND04 991 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 MRPL38Q96DV4 380 aaKnown RBP11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 ZNF558Q96NG5 402 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 FAM193BQ96PV7 902 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 LMAN2LQ9H0V9 348 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 PARVGQ9HBI0 331 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 ARHGAP28Q9P2N2 729 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 RCOR1Q9UKL0 485 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 PCDHA7Q9UN72 937 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 HES2Q9Y543 173 aa11.65□□□□□ -0.54
TRAPPC12-213ENST00000461577 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 GRM6O15303 877 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 NT5DC1Q5TFE4 455 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 ATF7IP2Q5U623 682 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 SHC4Q6S5L8 630 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 DHX58Q96C10 678 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 NTPCRQ9BSD7 190 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 GBP3Q9H0R5 595 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 NXF3Q9H4D5 531 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 ALG13Q9NP73 1137 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 KANSL3Q9P2N6 904 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 PARP2Q9UGN5 583 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 PLAGL2Q9UPG8 496 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 USP20Q9Y2K6 914 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 GIT1Q9Y2X7 761 aa11.64□□□□□ -0.55
TRAPPC12-213ENST00000461577 PLXNA4Q9HCM2 1894 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 A0A087X0B3 334 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 MYMKA6NI61 221 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 K7ENM7 598 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TRAK2O60296 914 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZC3H11AO75152 810 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 CSPG5O95196 566 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 POMCP01189 267 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 EDN1P05305 212 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 ITGB1P05556 798 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 MAPTP10636 758 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 AKAP5P24588 427 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 PPM1AP35813 382 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 ALDH7A1P49419 539 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 ZNF131P52739 623 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 NCKAP1LP55160 1127 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 BCAR1P56945 870 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TIGD5Q53EQ6 642 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 EEF1DP3Q658K8 133 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 KCNT2Q6UVM3 1135 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 FAM178BQ8IXR5 827 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 IQUBQ8NA54 791 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TMEM161BQ8NDZ6 487 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 POF1BQ8WVV4 589 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 DDX12PQ92771 950 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 BICD1Q96G01 975 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 RPS6KC1Q96S38 1066 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 GAD1Q99259 594 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 ACO2Q99798 780 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 PYM1Q9BRP8 204 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 LRRC27Q9C0I9 530 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 SCAND2PQ9GZW5 306 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 NRDE2Q9H7Z3 1164 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TBC1D13Q9NVG8 400 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 SPG21Q9NZD8 308 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 TNFSF13BQ9Y275 285 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 CDH23Q9H251 3354 aa11.63□□□□□ -0.55
TRAPPC12-213ENST00000461577 ARL5CA6NH57 179 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 POLR2DO15514 142 aaKnown RBP11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 FGF18O76093 207 aa11.62□□□□□ -0.55
TRAPPC12-213ENST00000461577 IDEP14735 1019 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms