RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 GARTP22102 1010 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 GLRA2P23416 452 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 CNGA1P29973 690 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 ARL2P36404 184 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 USP8P40818 1118 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 SLC26A2P50443 739 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 MXI1P50539 228 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 VAV2P52735 878 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 MAP2K1Q02750 393 aaPredicted RBP7.38□□□□□ -1.23
MSH2-204ENST00000461394 GRB14Q14449 540 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 ARHGAP44Q17R89 818 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 SLFN12LQ6IEE8 588 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 IQCEQ6IPM2 695 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 CCDC62Q6P9F0 684 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 GJB7Q6PEY0 223 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 TRIM65Q6PJ69 517 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 RHPN2Q8IUC4 686 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 CBWD2Q8IUF1 395 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 LRRC71Q8N4P6 559 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 AFG1LQ8WV93 481 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 TRAPPC12Q8WVT3 735 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 ATRIPQ8WXE1 791 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 PSPC1Q8WXF1 523 aaKnown RBP7.38□□□□□ -1.23
MSH2-204ENST00000461394 SYN2Q92777 582 aaPredicted RBP7.38□□□□□ -1.23
MSH2-204ENST00000461394 MAML3Q96JK9 1138 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 NLRP4Q96MN2 994 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 FNBP1Q96RU3 617 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 NAPGQ99747 312 aaPredicted RBP7.38□□□□□ -1.23
MSH2-204ENST00000461394 TCHPQ9BT92 498 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 MSTO1Q9BUK6 570 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 C2orf40Q9H1Z8 148 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 ZFYVE28Q9HCC9 887 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.23
MSH2-204ENST00000461394 PDLIM7Q9NR12 457 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 SEPT11Q9NVA2 429 aaKnown RBP7.38□□□□□ -1.23
MSH2-204ENST00000461394 ERAP1Q9NZ08 941 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 ARHGAP20Q9P2F6 1191 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 SUCLA2Q9P2R7 463 aaPredicted RBP7.38□□□□□ -1.23
MSH2-204ENST00000461394 DNAJC12Q9UKB3 198 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 PCDHA13Q9Y5I0 950 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 KAT6AQ92794 2004 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 ZNF236Q9UL36 1845 aa7.38□□□□□ -1.23
MSH2-204ENST00000461394 EVPLQ92817 2033 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 MGAMO43451 1857 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ZSWIM8A7E2V4 1837 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 SSU72P8A0A1W2PR75 194 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ZNF233A6NK53 670 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 IGF2BP3O00425 579 aaKnown RBP eCLIP7.37□□□□□ -1.23
MSH2-204ENST00000461394 MAPK13O15264 365 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 EXTL3O43909 919 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 PHACTR2O75167 634 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TACC1O75410 805 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ITGBL1O95965 494 aaPredicted RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 LDHAP00338 332 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 LGALS2P05162 132 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 PRKCBP05771 671 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TNNI1P19237 187 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 CYP2B6P20813 491 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 SCP2P22307 547 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 HNRNPH3P31942 346 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 DLG4P78352 724 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 GFPT1Q06210 699 aaPredicted RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 ARHGAP1Q07960 439 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 LAMTOR4Q0VGL1 99 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 SREBF2Q12772 1141 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ACVR2BQ13705 512 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 CAPSQ13938 189 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 MXD4Q14582 209 aaPredicted RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 TARBP2Q15633 366 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 CBWD6Q4V339 395 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 BRDTQ58F21 947 aaPredicted RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 CBWD3Q5JTY5 395 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ZNF484Q5JVG2 852 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 CBWD5Q5RIA9 395 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TMEM63BQ5T3F8 832 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 EFCAB12Q6NXP0 572 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TAPT1Q6NXT6 567 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ZBTB33Q86T24 672 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 RNF149Q8NC42 400 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ZSWIM2Q8NEG5 633 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 NPLOC4Q8TAT6 608 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 PRPF31Q8WWY3 499 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 SECISBP2LQ93073 1101 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 BORCS6Q96GS4 357 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 ZNF668Q96K58 619 aaPredicted RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 ALS2CR12Q96Q35 445 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 WDR24Q96S15 920 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 PPP1R16BQ96T49 567 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 EPAS1Q99814 870 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 NTPCRQ9BSD7 190 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 TINF2Q9BSI4 451 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TARS2Q9BW92 718 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 MRPL4Q9BYD3 311 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 IRX2Q9BZI1 471 aaPredicted RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 ABHD16BQ9H3Z7 469 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 KIAA1586Q9HCI6 787 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 UBE2TQ9NPD8 197 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms