RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 MCMBPQ9BTE3 642 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 HDAC8Q9BY41 377 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 FAM126AQ9BYI3 521 aaPredicted RBP9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 KRTAP4-8Q9BYQ9 185 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 AS3MTQ9HBK9 375 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 CYP26B1Q9NR63 512 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 INTS7Q9NVH2 962 aaKnown RBP9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 MTMR4Q9NYA4 1195 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 AGTPBP1Q9UPW5 1226 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 RAXQ9Y2V3 346 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 RBM8AQ9Y5S9 174 aaKnown RBP9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 LOC285556D6RIA3 1793 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 CENPFP49454 3210 aa9.39□□□□□ -0.91
ECHDC1-212ENST00000461239 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 BLACEA4D250 179 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 C1QTNF9BB2RNN3 333 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 C19orf81C9J6K1 198 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 PEX10O60683 326 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 DNAJC8O75937 253 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 SNRPB2P08579 225 aaKnown RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 HOXA7P31268 230 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 RCSD1Q6JBY9 416 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 FASTKD5Q7L8L6 764 aaKnown RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 RNF180Q86T96 592 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 PIWIL2Q8TC59 973 aaKnown RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 ZCCHC17Q9NP64 241 aaKnown RBP9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 NYAP2Q9P242 653 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 CTNNA3Q9UI47 895 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 MYH8P13535 1937 aa9.38□□□□□ -0.91
ECHDC1-212ENST00000461239 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 B4E1Z4 1266 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 MEIS1O00470 390 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 SLC27A2O14975 620 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 RANBP6O60518 1105 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 TLR2O60603 784 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 SLC3A2P08195 630 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 SRFP11831 508 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 VCAM1P19320 739 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 CTGFP29279 349 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 GABREP78334 506 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 IMMTQ16891 758 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 PRSS53Q2L4Q9 553 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 RRP12Q5JTH9 1297 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 OTUD7BQ6GQQ9 843 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 CRTC3Q6UUV7 619 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 C17orf99Q6UX52 265 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 MFSD6Q6ZSS7 791 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 CYB5R4Q7L1T6 521 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 RASGRP2Q7LDG7 609 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 MFSD4AQ8N468 514 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 CHAC2Q8WUX2 184 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 P2RX7Q99572 595 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 TARS2Q9BW92 718 aaKnown RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 ASCC2Q9H1I8 757 aaPredicted RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 VCPKMTQ9H867 229 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 ZNF287Q9HBT7 754 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 TCP11L1Q9NUJ3 509 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 ZSWIM5Q9P217 1185 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 MAGEC2Q9UBF1 373 aaPredicted RBP9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 CLIP2Q9UDT6 1046 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 SLC45A1Q9Y2W3 748 aa9.37□□□□□ -0.91
ECHDC1-212ENST00000461239 TSPY2A6NKD2 308 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 E7EWF7 191 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 CPP00450 1065 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 GSNP06396 782 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 PCP11498 1178 aaKnown RBP9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 ITIH2P19823 946 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 DPY19L1Q2PZI1 675 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 CREB3L3Q68CJ9 461 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 DENND5AQ6IQ26 1287 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 CATSPERGQ6ZRH7 1159 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 LRRTM3Q86VH5 581 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 KREMEN2Q8NCW0 462 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 ENOX1Q8TC92 643 aaKnown RBP9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 PTPRN2Q92932 1015 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 GPR62Q9BZJ7 368 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 RPAP3Q9H6T3 665 aaPredicted RBP9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 CAAP1Q9H8G2 361 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 TXNRD2Q9NNW7 524 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 NDOR1Q9UHB4 597 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 CPA4Q9UI42 421 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 U3KQE9 123 aa9.36□□□□□ -0.91
ECHDC1-212ENST00000461239 RLFQ13129 1914 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 F5H6K3 240 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 CNMDO75829 334 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 TTLL1O95922 423 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 NDUFB10O96000 172 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 KCNJ6P48051 423 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 USP14P54578 494 aa9.35□□□□□ -0.91
ECHDC1-212ENST00000461239 ANTXR2P58335 489 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms