RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DDHD2O94830 711 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 ALDH2P05091 517 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 WEE2P0C1S8 567 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 CPA1P15085 419 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 KLRC2P26717 231 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 DSG1Q02413 1049 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 MXD4Q14582 209 aaPredicted RBP16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 EMC2Q15006 297 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 NOTUMQ6P988 496 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 ZNF280BQ86YH2 543 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 COLGALT2Q8IYK4 626 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 BORCS6Q96GS4 357 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 FAM193BQ96PV7 902 aaPredicted RBP16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 FAN1Q9Y2M0 1017 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 SLC37A4O43826 429 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 ERLIN2O94905 339 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 POU2F2P09086 479 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 SRFP11831 508 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 SPIRE1Q08AE8 756 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 TOB2Q14106 344 aaPredicted RBP16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 ANGPT1Q15389 498 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 PLA2G4FQ68DD2 849 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 PHLDB3Q6NSJ2 640 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 FRMD5Q7Z6J6 570 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 NEK8Q86SG6 692 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 HACE1Q8IYU2 909 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 DTWD2Q8NBA8 298 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 LXNQ9BS40 222 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 TM6SF1Q9BZW5 370 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 CHST7Q9NS84 486 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 FNIP2Q9P278 1114 aa16.25■□□□□ 0.19
DNMT3A-207ENST00000461228 DDX11L8A8MPP1 907 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 CPLX1O14810 134 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 TEX28O15482 410 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 TSPAN1O60635 241 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 N4BP1O75113 896 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 CDKL5O76039 1030 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 LYPLA2O95372 231 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 YWHABP31946 246 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 LAMTOR4Q0VGL1 99 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 KIAA0319Q5VV43 1072 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 OTUD6AQ7L8S5 288 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 SLFN12Q8IYM2 578 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 SIX5Q8N196 739 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 SMG8Q8ND04 991 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 PRPF31Q8WWY3 499 aaKnown RBP16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 GJA10Q969M2 543 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 CEP170P1Q96L14 293 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 PHF20Q9BVI0 1012 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 GBP3Q9H0R5 595 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 MINDY3Q9H8M7 445 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 ZSWIM6Q9HCJ5 1215 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 SLC2A4RGQ9NR83 387 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 GIT1Q9Y2X7 761 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 IPPQ9Y573 584 aa16.24■□□□□ 0.19
DNMT3A-207ENST00000461228 VWA8A3KMH1 1905 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 EML1O00423 815 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 NR1I2O75469 434 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 PTENP60484 403 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 GRIK3Q13003 919 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 EPHA7Q15375 998 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 ZC3H14Q6PJT7 736 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 FLCNQ8NFG4 579 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 ZNF707Q96C28 371 aaPredicted RBP16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 ZSWIM4Q9H7M6 989 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 NCOA5Q9HCD5 579 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 WRAP73Q9P2S5 460 aaPredicted RBP16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
DNMT3A-207ENST00000461228 ANHXE9PGG2 379 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 ITGA4P13612 1032 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 XBP1P17861 261 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 HOXA9P31269 272 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 TFDP1Q14186 410 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 INF2Q27J81 1249 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 RNF149Q8NC42 400 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 PRIMPOLQ96LW4 560 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 MTRQ99707 1265 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 CSRNP2Q9H175 543 aa16.22■□□□□ 0.19
DNMT3A-207ENST00000461228 CCDC194A0A1B0GVG4 234 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 DGAT1O75907 488 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 MLH1P40692 756 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 AFF1P51825 1210 aaKnown RBP16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 AK2P54819 239 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 NPEPPSP55786 919 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 CCT2P78371 535 aaKnown RBP16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 NCBP1Q09161 790 aaKnown RBP16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 AMHR2Q16671 573 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 ADSSL1Q8N142 457 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 HAS1Q92839 578 aa16.21■□□□□ 0.19
DNMT3A-207ENST00000461228 SH2D3AQ9BRG2 576 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms