RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 IER5LQ5T953 404 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 KIAA1841Q6NSI8 718 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 KANK3Q6NY19 840 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 NOTUMQ6P988 496 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TMC5Q6UXY8 1006 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TDRD5Q8NAT2 981 aaKnown RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 PRSS33Q8NF86 280 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TNFRSF25Q93038 417 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 ASIC4Q96FT7 647 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TTC12Q9H892 705 aaPredicted RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 XPNPEP1Q9NQW7 623 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 SORCS3Q9UPU3 1222 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
COL16A1-206ENST00000461217 IPPQ9Y573 584 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 TECTAO75443 2155 aa16.81■□□□□ 0.28
COL16A1-206ENST00000461217 NRP1O14786 923 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 DGAT1O75907 488 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 AXLP30530 894 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 PTENP60484 403 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 PCBP1Q15365 356 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL16A1-206ENST00000461217 DIS3L2Q8IYB7 885 aaKnown RBP16.8■□□□□ 0.28
COL16A1-206ENST00000461217 SMG8Q8ND04 991 aaKnown RBP16.8■□□□□ 0.28
COL16A1-206ENST00000461217 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
COL16A1-206ENST00000461217 SLC22A17Q8WUG5 538 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 CPB2Q96IY4 423 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 APOL6Q9BWW8 343 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 VN1R3Q9BXE9 311 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 EIF2AQ9BY44 585 aaKnown RBP16.8■□□□□ 0.28
COL16A1-206ENST00000461217 SFXN1Q9H9B4 322 aa16.8■□□□□ 0.28
COL16A1-206ENST00000461217 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
COL16A1-206ENST00000461217 BTBD18B2RXH4 712 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 C2CD2LO14523 706 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 URODP06132 367 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 MLH1P40692 756 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 OR1G1P47890 313 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 VCPP55072 806 aaKnown RBP16.79■□□□□ 0.28
COL16A1-206ENST00000461217 CAPSQ13938 189 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 UBALD2Q8IYN6 164 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 HACE1Q8IYU2 909 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 GAD1Q99259 594 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 HES2Q9Y543 173 aa16.79■□□□□ 0.28
COL16A1-206ENST00000461217 MUC6Q6W4X9 2439 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 KMT2EQ8IZD2 1858 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 ARL5CA6NH57 179 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 JAK2O60674 1132 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 USO1O60763 962 aaKnown RBP16.78■□□□□ 0.28
COL16A1-206ENST00000461217 NR1I2O75469 434 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 LYPLA2O95372 231 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 CNPP09543 421 aaKnown RBP16.78■□□□□ 0.28
COL16A1-206ENST00000461217 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 SCNN1GP51170 649 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 CUL4AQ13619 759 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 PIGOQ8TEQ8 1089 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 INTS4Q96HW7 963 aaKnown RBP16.78■□□□□ 0.28
COL16A1-206ENST00000461217 HSD17B14Q9BPX1 270 aa16.78■□□□□ 0.28
COL16A1-206ENST00000461217 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
COL16A1-206ENST00000461217 POTEMA6NI47 508 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 BRD1O95696 1058 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 PDGFBP01127 241 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-206ENST00000461217 SOD2P04179 222 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 ASGR2P07307 311 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 AVPR2P30518 371 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 RARRES1P49788 294 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 CLCN4P51793 760 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 MBTD1Q05BQ5 628 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 CCDC149Q6ZUS6 474 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 MAEAQ7L5Y9 396 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 ACSF2Q96CM8 615 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-206ENST00000461217 ZFP42Q96MM3 310 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 HERC2P3Q9BVR0 1158 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.28
COL16A1-206ENST00000461217 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 MARCH5Q9NX47 278 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 LIMD1Q9UGP4 676 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 USTQ9Y2C2 406 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.28
COL16A1-206ENST00000461217 A0A087WWV3 80 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 LRRIQ4A6NIV6 560 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 WNT7AO00755 349 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 ADH1AP07327 375 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-206ENST00000461217 GLRA2P23416 452 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 MCM7P33993 719 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 ARL2P36404 184 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 GLUD2P49448 558 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 GUCY1B3Q02153 619 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 POU5F1BQ06416 359 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
COL16A1-206ENST00000461217 ELMSAN1Q6PJG2 1045 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 GPR149Q86SP6 731 aa16.76■□□□□ 0.27
COL16A1-206ENST00000461217 CDR2LQ86X02 465 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms