RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 KANSL3Q9P2N6 904 aa24.82■■□□□ 1.56
TRAF4-207ENST00000461195 HES2Q9Y543 173 aa24.82■■□□□ 1.56
TRAF4-207ENST00000461195 MYH15Q9Y2K3 1946 aa24.82■■□□□ 1.56
TRAF4-207ENST00000461195 CCDC169A6NNP5 214 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 N4BP3O15049 544 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 PDIA4P13667 645 aaKnown RBP24.81■■□□□ 1.56
TRAF4-207ENST00000461195 MARCKSP29966 332 aaPredicted RBP24.81■■□□□ 1.56
TRAF4-207ENST00000461195 SLC12A3P55017 1021 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 CEBPZQ03701 1054 aaKnown RBP24.81■■□□□ 1.56
TRAF4-207ENST00000461195 HYAL1Q12794 435 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 MAPK7Q13164 816 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 DMP1Q13316 513 aaPredicted RBP24.81■■□□□ 1.56
TRAF4-207ENST00000461195 COL19A1Q14993 1142 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 PDE12Q6L8Q7 609 aaKnown RBP24.81■■□□□ 1.56
TRAF4-207ENST00000461195 RASSF8Q8NHQ8 419 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 MICAL1Q8TDZ2 1067 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 RNF39Q9H2S5 420 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 C17orf75Q9HAS0 396 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 KCND2Q9NZV8 630 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 MYH11P35749 1972 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 BRWD1Q9NSI6 2320 aa24.81■■□□□ 1.56
TRAF4-207ENST00000461195 BMP1P13497 986 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 KCNA5P22460 613 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 NPTX2P47972 431 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 KCNQ1P51787 676 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 USP28Q96RU2 1077 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 APOL6Q9BWW8 343 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 GBP3Q9H0R5 595 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 NXF3Q9H4D5 531 aaKnown RBP24.8■■□□□ 1.56
TRAF4-207ENST00000461195 PDZD7Q9H5P4 517 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 FBXO2Q9UK22 296 aaPredicted RBP24.8■■□□□ 1.56
TRAF4-207ENST00000461195 GIT1Q9Y2X7 761 aa24.8■■□□□ 1.56
TRAF4-207ENST00000461195 SRPRBQ9Y5M8 271 aaKnown RBP24.8■■□□□ 1.56
TRAF4-207ENST00000461195 TTLL13PA6NNM8 815 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 NT5C1B-RDH14C9J2C7 533 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 K7ERI5 159 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 AFF1P51825 1210 aaKnown RBP24.79■■□□□ 1.56
TRAF4-207ENST00000461195 ERVFC1P60507 584 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 RAD51AP2Q09MP3 1159 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 KARSQ15046 597 aaKnown RBP24.79■■□□□ 1.56
TRAF4-207ENST00000461195 EP400NLQ6ZTU2 488 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 ZNF280BQ86YH2 543 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 FAM193BQ96PV7 902 aaPredicted RBP24.79■■□□□ 1.56
TRAF4-207ENST00000461195 CCSER1Q9C0I3 900 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 IGFLR1Q9H665 355 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 KMT5AQ9NQR1 393 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 CLDND1Q9NY35 253 aa24.79■■□□□ 1.56
TRAF4-207ENST00000461195 MORC2Q9Y6X9 1032 aaPredicted RBP24.79■■□□□ 1.56
TRAF4-207ENST00000461195 ARL5CA6NH57 179 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 FSCN2O14926 492 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 INPPL1O15357 1258 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 POMCP01189 267 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 GALTP07902 379 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 PLCG1P19174 1290 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 MLH1P40692 756 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 ADGRD2Q7Z7M1 963 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 TMEM169Q96HH4 297 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 GAD1Q99259 594 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 ADPGKQ9BRR6 497 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 TMEM134Q9H6X4 195 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 DNAJB4Q9UDY4 337 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
TRAF4-207ENST00000461195 KCNG1Q9UIX4 513 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 RBM19Q9Y4C8 960 aaKnown RBP24.78■■□□□ 1.56
TRAF4-207ENST00000461195 PCDHGC5Q9Y5F6 944 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 PHLPP2Q6ZVD8 1323 aa24.78■■□□□ 1.56
TRAF4-207ENST00000461195 TDRD15B5MCY1 1934 aaKnown RBP24.78■■□□□ 1.56
TRAF4-207ENST00000461195 SFI1A8K8P3 1242 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 DDHD2O94830 711 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 EDN1P05305 212 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 GTF2F1P35269 517 aaKnown RBP eCLIP24.77■■□□□ 1.561e-10■■■■□ 26.4
TRAF4-207ENST00000461195 SLC39A14Q15043 492 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 CTC1Q2NKJ3 1217 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 LEXMQ3ZCV2 418 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 EPSTI1Q96J88 318 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 TCF25Q9BQ70 676 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 ENTPD7Q9NQZ7 604 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 BLOC1S4Q9NUP1 217 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 ARHGAP28Q9P2N2 729 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 USP20Q9Y2K6 914 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 ZMYM2Q9UBW7 1377 aa24.77■■□□□ 1.56
TRAF4-207ENST00000461195 B4GALT3O60512 393 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 PLS3P13797 630 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 AKAP5P24588 427 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 NRIP1P48552 1158 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 SLC11A1P49279 550 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 ARSHQ5FYA8 562 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 SPECC1Q5M775 1068 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 NT5DC1Q5TFE4 455 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 ATF7IP2Q5U623 682 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 PLPP4Q5VZY2 271 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 GPBP1Q86WP2 473 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 LRRC15Q8TF66 581 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 RAD54LQ92698 747 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 IGSF21Q96ID5 467 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 ZFP42Q96MM3 310 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 ZNF396Q96N95 335 aaPredicted RBP24.76■■□□□ 1.55
TRAF4-207ENST00000461195 CLIC6Q96NY7 704 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 TMEM175Q9BSA9 504 aa24.76■■□□□ 1.55
TRAF4-207ENST00000461195 NTPCRQ9BSD7 190 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms