RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 ALKBH2Q6NS38 261 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 FAM173BQ6P4H8 233 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ATCAYQ86WG3 371 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 LINC00301Q8NCQ3 95 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ETNPPLQ8TBG4 499 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 AFG1LQ8WV93 481 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 EDEM1Q92611 657 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 LENG9Q96B70 501 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ZNF333Q96JL9 665 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 FAM167AQ96KS9 214 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 GLT1D1Q96MS3 346 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 MTMR9Q96QG7 549 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 MTG1Q9BT17 334 aaPredicted RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 LRRC27Q9C0I9 530 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 KATNBL1Q9H079 304 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 NT5C3AQ9H0P0 336 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ZSWIM4Q9H7M6 989 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 TUFT1Q9NNX1 390 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ZNF302Q9NR11 478 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ERAP1Q9NZ08 941 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ZDHHC9Q9Y397 364 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 SRPRBQ9Y5M8 271 aaKnown RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 KDM3AQ9Y4C1 1321 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 PARP14Q460N5 1801 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ZNF236Q9UL36 1845 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 RRN3P2A6NIE6 340 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 LINC01387J3KSC0 135 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 DNM1LO00429 736 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 ATP9AO75110 1047 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 SUPT20HL2P0C7V6 817 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 COL11A1P12107 1806 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 XRCC6P12956 609 aaKnown RBP eCLIP6.63□□□□□ -1.35
NUP98-208ENST00000461047 CST5P28325 142 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 MARCKSP29966 332 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 TCF7P36402 384 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 QARSP47897 775 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 PSMC5P62195 406 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 NKX3-2P78367 333 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 ATP11AP98196 1134 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 CAP1Q01518 475 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 SP2Q02086 613 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 ITGB3BPQ13352 177 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 ADALQ6DHV7 355 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 SWSAP1Q6NVH7 229 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 CCDC73Q6ZRK6 1079 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 PLPPR4Q7Z2D5 763 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 TPH2Q8IWU9 490 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 C7orf31Q8N865 590 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 C4orf32Q8N8J7 132 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 TRPV1Q8NER1 839 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 U2AF1L4Q8WU68 220 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 LEO1Q8WVC0 666 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 HAS1Q92839 578 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 GPR20Q99678 358 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 JPH2Q9BR39 696 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 UPF3AQ9H1J1 476 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 TMEM60Q9H2L4 133 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 UNC45AQ9H3U1 944 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 PAK6Q9NQU5 681 aaPredicted RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 HOOK1Q9UJC3 728 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 DNM3Q9UQ16 869 aa6.63□□□□□ -1.35
NUP98-208ENST00000461047 GNEQ9Y223 722 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 DDX49Q9Y6V7 483 aaKnown RBP6.63□□□□□ -1.35
NUP98-208ENST00000461047 SYNRGQ9UMZ2 1314 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.62□□□□□ -1.35
NUP98-208ENST00000461047 A0A1W2PQ27 194 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 A0A1W2PQ64 194 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 A0A1W2PQD8 194 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 H3BRB1 525 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 HBP1O60381 514 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 SORBS3O60504 671 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 ARIH2O95376 493 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 PGK1P00558 417 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 RPLP2P05387 115 aaKnown RBP6.62□□□□□ -1.35
NUP98-208ENST00000461047 MMP3P08254 477 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 CES1P23141 567 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 RPA1P27694 616 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 CDC25BP30305 580 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 GJA8P48165 433 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 DNM2P50570 870 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 ACLYP53396 1101 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 CHMP4BP1P59074 171 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 AMPD3Q01432 767 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 PTPAQ15257 358 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 LRRC41Q15345 812 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 ZRSR1Q15695 479 aaKnown RBP6.62□□□□□ -1.35
NUP98-208ENST00000461047 KCNA10Q16322 511 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 HSDL1Q3SXM5 330 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 XKR3Q5GH77 459 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 COL13A1Q5TAT6 717 aaPredicted RBP6.62□□□□□ -1.35
NUP98-208ENST00000461047 RRAGBQ5VZM2 374 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 ABHD15Q6UXT9 468 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 CABP7Q86V35 215 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 IGSF22Q8N9C0 903 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 IQUBQ8NA54 791 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 AFAP1L1Q8TED9 768 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 SNX29Q8TEQ0 813 aa6.62□□□□□ -1.35
NUP98-208ENST00000461047 COPS5Q92905 334 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms