RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 KIAA1671Q9BY89 1806 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 MYH11P35749 1972 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LRRIQ4A6NIV6 560 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PLCG1P19174 1290 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ME1P48163 572 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KARSQ15046 597 aaKnown RBP14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SMAD2Q15796 467 aaKnown RBP14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CLLU1OSQ5K130 101 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CCDC73Q6ZRK6 1079 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LRRC55Q6ZSA7 311 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 C1orf186Q6ZWK4 172 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TMC7Q7Z402 723 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KCNK18Q7Z418 384 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ZNF598Q86UK7 904 aaKnown RBP14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ZBTB8OSQ8IWT0 167 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ADHFE1Q8IWW8 467 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CNNM3Q8NE01 707 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ASAP3Q8TDY4 903 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TMEM169Q96HH4 297 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DRC1Q96MC2 740 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TCF25Q9BQ70 676 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NFKBIZQ9BYH8 718 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SCAND2PQ9GZW5 306 aaPredicted RBP14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 C2orf40Q9H1Z8 148 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GPRC5CQ9NQ84 441 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 AGPAT5Q9NUQ2 364 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KANSL3Q9P2N6 904 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 STK17AQ9UEE5 414 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RCOR1Q9UKL0 485 aa14.62□□□□□ -0.07
RAB11FIP3-207ENST00000461009 INO80B-WBP1J3KQ70 363 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 MBTPS2O43462 519 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ZNF623O75123 536 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 COL9A1P20849 921 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GUCY2CP25092 1073 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 AXLP30530 894 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CA8P35219 290 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NAMPTP43490 491 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CAPSQ13938 189 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NOMO2Q5JPE7 1267 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TMEM31Q5JXX7 168 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PLPP4Q5VZY2 271 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ADGRD2Q7Z7M1 963 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 HACE1Q8IYU2 909 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DEPTORQ8TB45 409 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RAD54LQ92698 747 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 FAM193BQ96PV7 902 aaPredicted RBP14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 EPHX3Q9H6B9 360 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 C17orf75Q9HAS0 396 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 UBN1Q9NPG3 1134 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RNF19AQ9NV58 838 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 STK39Q9UEW8 545 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PCDHB2Q9Y5E7 798 aa14.61□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NCOR1O75376 2440 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 FSCN2O14926 492 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PER2O15055 1255 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LINC01565O15544 149 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 TBX10O75333 385 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 KRT18P05783 430 aaKnown RBP14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SLC12A3P55017 1021 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 BCAR1P56945 870 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ERVFC1P60507 584 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DLX2Q07687 328 aaPredicted RBP14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 COASYQ13057 564 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GIT2Q14161 759 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DHX8Q14562 1220 aaKnown RBP14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DUSP6Q16828 381 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 USP49Q70CQ1 688 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SV2BQ7L1I2 683 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LARP4BQ92615 738 aaKnown RBP14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CCDC51Q96ER9 411 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SPATA32Q96LK8 384 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 RUSC1Q9BVN2 902 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 BLOC1S4Q9NUP1 217 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 FAM13BQ9NYF5 915 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 HCSTQ9UBK5 93 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PCDHA7Q9UN72 937 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 INPP5FQ9Y2H2 1132 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 BRWD1Q9NSI6 2320 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 CNTNAP2Q9UHC6 1331 aa14.6□□□□□ -0.07
RAB11FIP3-207ENST00000461009 HIP1RO75146 1068 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ZC3H11AO75152 810 aaKnown RBP eCLIP14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ATF7P17544 494 aaPredicted RBP14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 STAT6P42226 847 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 EFNA5P52803 228 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SMTNP53814 917 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 ZP2Q05996 745 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 DMP1Q13316 513 aaPredicted RBP14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 MCM6Q14566 821 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LONRF3Q496Y0 759 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 NOTUMQ6P988 496 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 GPBP1Q86WP2 473 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 LPPQ93052 612 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 MSLNLQ96KJ4 702 aa14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
RAB11FIP3-207ENST00000461009 PANK2Q9BZ23 570 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms