RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 PTPN18Q99952 460 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 CDH19Q9H159 772 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 SLC6A15Q9H2J7 730 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 GREM2Q9H772 168 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 C14orf93Q9H972 538 aaKnown RBP4.4□□□□□ -1.71
VPS8-215ENST00000460158 TCF7L1Q9HCS4 588 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 SMPD4Q9NXE4 827 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 TCEAL9Q9UHQ7 104 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 SERPINB13Q9UIV8 391 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 ZNF180Q9UJW8 692 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 ZBTB21Q9ULJ3 1066 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 DNM3Q9UQ16 869 aa4.4□□□□□ -1.71
VPS8-215ENST00000460158 E2F8A0AVK6 867 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 LAMTOR5O43504 91 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 AKR1B10O60218 316 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 PARNO95453 639 aaKnown RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 PF4V1P10720 104 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 GSPT1P15170 499 aaKnown RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 ADSLP30566 484 aaPredicted RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 RAC3P60763 192 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 MEF2AQ02078 507 aaPredicted RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 KIF23Q02241 960 aaPredicted RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 SAFB2Q14151 953 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS8-215ENST00000460158 PLEKHH3Q7Z736 793 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 THEMISQ8N1K5 641 aaPredicted RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS8-215ENST00000460158 GPR156Q8NFN8 814 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 OR2I1PQ8NGU4 316 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 SNX33Q8WV41 574 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 NRG4Q8WWG1 115 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 JPH3Q8WXH2 748 aaPredicted RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 DPF2Q92785 391 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 HSPBAP1Q96EW2 488 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 NEIL1Q96FI4 390 aaPredicted RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 PAWRQ96IZ0 340 aaKnown RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 SAMD11Q96NU1 681 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 LRRC37BQ96QE4 947 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 GPHA2Q96T91 129 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 DPYSL5Q9BPU6 564 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 ADI1Q9BV57 179 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 C1QTNF3Q9BXJ4 246 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 C12orf65Q9H3J6 166 aaKnown RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 JADE2Q9NQC1 790 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 TLR9Q9NR96 1032 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 RBM12Q9NTZ6 932 aaKnown RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 PUF60Q9UHX1 559 aaKnown RBP4.39□□□□□ -1.71
VPS8-215ENST00000460158 ANKRD6Q9Y2G4 727 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 GIT1Q9Y2X7 761 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 RPTORQ8N122 1335 aa4.39□□□□□ -1.71
VPS8-215ENST00000460158 SLC26A4O43511 780 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 AKAP8O43823 692 aaKnown RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 IL33O95760 270 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 SCGB1D2O95969 90 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 JUNP05412 331 aaKnown RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 CT47B1P0C2W7 299 aaPredicted RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 EPHB4P54760 987 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 ADKP55263 362 aaKnown RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 ZXDAP98168 799 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 NOMO1Q15155 1222 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 PPP2R5AQ15172 486 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 TBC1D10BQ4KMP7 808 aaPredicted RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 C19orf54Q5BKX5 351 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 KRT40Q6A162 431 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 Q6ZVL8 140 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 ADGRE4PQ86SQ3 457 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 TPH2Q8IWU9 490 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 RABGGTAQ92696 567 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 TSR2Q969E8 191 aaKnown RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 COA7Q96BR5 231 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 LMF1Q96S06 567 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 MEGF9Q9H1U4 602 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 AGO3Q9H9G7 860 aaKnown RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 SEC61A2Q9H9S3 476 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 INTUQ9ULD6 942 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 NOB1Q9ULX3 412 aaKnown RBP4.38□□□□□ -1.71
VPS8-215ENST00000460158 OAZ3Q9UMX2 235 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 LIMCH1Q9UPQ0 1083 aa4.38□□□□□ -1.71
VPS8-215ENST00000460158 MATN3O15232 486 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 MTSS1O43312 755 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 TSPAN6O43657 245 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CDC14BO60729 498 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CR2P20023 1033 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 EDNRBP24530 442 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CASRP41180 1078 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 SLC16A1P53985 500 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 MGAT2Q10469 447 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 RIN1Q13671 783 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 SEPT2Q15019 361 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 SURF1Q15526 300 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 MST1LQ2TV78 715 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 UAP1L1Q3KQV9 507 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 GAGE13Q4V321 117 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 FMNL3Q8IVF7 1028 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 GPR135Q8IZ08 494 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 CHPFQ8IZ52 775 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 MIER2Q8N344 545 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 LILRA3Q8N6C8 439 aaPredicted RBP4.37□□□□□ -1.71
VPS8-215ENST00000460158 SHCBP1Q8NEM2 672 aa4.37□□□□□ -1.71
VPS8-215ENST00000460158 HOXB13Q92826 284 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms