RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 MSLNLQ96KJ4 702 aa23.73■■□□□ 1.39
CCDC78-205ENST00000460023 POP1Q99575 1024 aaKnown RBP23.73■■□□□ 1.39
CCDC78-205ENST00000460023 TIPINQ9BVW5 301 aa23.73■■□□□ 1.39
CCDC78-205ENST00000460023 IRAK3Q9Y616 596 aa23.73■■□□□ 1.39
CCDC78-205ENST00000460023 PHLPP2Q6ZVD8 1323 aa23.73■■□□□ 1.39
CCDC78-205ENST00000460023 MBTPS2O43462 519 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 TBX10O75333 385 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 PBX3P40426 434 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 ECM1Q16610 540 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 PLPP4Q5VZY2 271 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 AK8Q96MA6 479 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 C1QTNF1Q9BXJ1 281 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 EIF2AQ9BY44 585 aaKnown RBP23.72■■□□□ 1.39
CCDC78-205ENST00000460023 C17orf75Q9HAS0 396 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 FAN1Q9Y2M0 1017 aa23.72■■□□□ 1.39
CCDC78-205ENST00000460023 NT5C1B-RDH14C9J2C7 533 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 ACKR2O00590 384 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 N4BP3O15049 544 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 PER2O15055 1255 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 LINC01565O15544 149 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 HYIQ5T013 277 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 APBB1IPQ7Z5R6 666 aaPredicted RBP23.71■■□□□ 1.39
CCDC78-205ENST00000460023 ADHFE1Q8IWW8 467 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 VPS52Q8N1B4 723 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 TMEM87AQ8NBN3 555 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 INTS4Q96HW7 963 aaKnown RBP23.71■■□□□ 1.39
CCDC78-205ENST00000460023 ADPGKQ9BRR6 497 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 CLEC1BQ9P126 229 aa23.71■■□□□ 1.39
CCDC78-205ENST00000460023 BDP1A6H8Y1 2624 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 MUC3AQ02505 3323 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 ARL5CA6NH57 179 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 CXCL14O95715 111 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 HOXB8P17481 243 aaPredicted RBP23.7■■□□□ 1.38
CCDC78-205ENST00000460023 PRPF4BQ13523 1007 aaKnown RBP23.7■■□□□ 1.38
CCDC78-205ENST00000460023 IL17AQ16552 155 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 ZNF280BQ86YH2 543 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 SMRP1Q8NCR6 262 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 DRC1Q96MC2 740 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 GBP3Q9H0R5 595 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 KCND2Q9NZV8 630 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 PCDHGC5Q9Y5F6 944 aa23.7■■□□□ 1.38
CCDC78-205ENST00000460023 C2orf71A6NGG8 1288 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 DDHD2O94830 711 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 POMCP01189 267 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 CTSAP10619 480 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 SSTR3P32745 418 aaPredicted RBP23.69■■□□□ 1.38
CCDC78-205ENST00000460023 KCNC3Q14003 757 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 TMEM132AQ24JP5 1023 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 CASP10Q92851 521 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 CDK5RAP3Q96JB5 506 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 GAD1Q99259 594 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 DNAJB4Q9UDY4 337 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 SSX2IPQ9Y2D8 614 aa23.69■■□□□ 1.38
CCDC78-205ENST00000460023 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
CCDC78-205ENST00000460023 VWA3AA6NCI4 1184 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 HIDE1A8MVS5 230 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 E9PMD0 336 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 K7ERI5 159 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 B4GALT5O43286 388 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 GLP2RO95838 553 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 PRKCBP05771 671 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 SLC11A1P49279 550 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 MMTAG2Q9BU76 263 aaKnown RBP23.68■■□□□ 1.38
CCDC78-205ENST00000460023 ZBP1Q9H171 429 aa23.68■■□□□ 1.38
CCDC78-205ENST00000460023 NRP1O14786 923 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 NPTXRO95502 500 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 ALADP13716 330 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 CDC25AP30304 524 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 MLH1P40692 756 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 ZP2Q05996 745 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 DMP1Q13316 513 aaPredicted RBP23.67■■□□□ 1.38
CCDC78-205ENST00000460023 CLUL1Q15846 466 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 RINT1Q6NUQ1 792 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 PPFIBP1Q86W92 1011 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 COLGALT2Q8IYK4 626 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 BSNDQ8WZ55 320 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 CCDC113Q9H0I3 377 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 RNF39Q9H2S5 420 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 TMEM134Q9H6X4 195 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 BARX2Q9UMQ3 279 aaPredicted RBP23.67■■□□□ 1.38
CCDC78-205ENST00000460023 HES2Q9Y543 173 aa23.67■■□□□ 1.38
CCDC78-205ENST00000460023 C19orf67A6NJJ6 358 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 PP2D1A8MPX8 630 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 GUCY2CP25092 1073 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 AFF1P51825 1210 aaKnown RBP23.66■■□□□ 1.38
CCDC78-205ENST00000460023 DSC1Q08554 894 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 C1orf186Q6ZWK4 172 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 SYT2Q8N9I0 419 aaPredicted RBP23.66■■□□□ 1.38
CCDC78-205ENST00000460023 COLEC11Q9BWP8 271 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 NXF3Q9H4D5 531 aaKnown RBP23.66■■□□□ 1.38
CCDC78-205ENST00000460023 PARP2Q9UGN5 583 aa23.66■■□□□ 1.38
CCDC78-205ENST00000460023 PI4K2BG5E9Z4 385 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 CA8P35219 290 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 UBA7P41226 1012 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 GRIK3Q13003 919 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 DCAF4L1Q3SXM0 396 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 TPRNQ4KMQ1 711 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 ANKRD54Q6NXT1 300 aa23.65■■□□□ 1.38
CCDC78-205ENST00000460023 TMEM173Q86WV6 379 aaPredicted RBP23.65■■□□□ 1.38
CCDC78-205ENST00000460023 CALML4Q96GE6 196 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms