RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 PAPSS2O95340 614 aaPredicted RBP15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 TWF2Q6IBS0 349 aaKnown RBP15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 EFCAB12Q6NXP0 572 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 TRMT1LQ7Z2T5 733 aaKnown RBP15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 FAM3CQ92520 227 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 UBAC1Q9BSL1 405 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 EDEM2Q9BV94 578 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 ZNF302Q9NR11 478 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 CHST12Q9NRB3 414 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 KLK13Q9UKR3 277 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 MSRB2Q9Y3D2 182 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 F5P12259 2224 aa15.31■□□□□ 0.04
PCOLCE-202ENST00000460002 EIF4E1BA6NMX2 242 aaKnown RBP15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 F8W810 466 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 CEACAM1P13688 526 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 RPL17P18621 184 aaKnown RBP15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 MPLP40238 635 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 TROAPQ12815 778 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 POTEHQ6S545 545 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 AGMOQ6ZNB7 445 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 KBTBD6Q86V97 674 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 WDR5BQ86VZ2 330 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 URGCPQ8TCY9 931 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 MBOAT7Q96N66 472 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 MXRA8Q9BRK3 442 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 DCTPP1Q9H773 170 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 CHST7Q9NS84 486 aa15.3■□□□□ 0.04
PCOLCE-202ENST00000460002 DDX39AO00148 427 aaKnown RBP15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 ZNF623O75123 536 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 POMCP01189 267 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 UBE2SQ16763 222 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 TANGO2Q6ICL3 276 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 SWSAP1Q6NVH7 229 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 CKAP2LQ8IYA6 745 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 GLIS3Q8NEA6 775 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 ING5Q8WYH8 240 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 SCLT1Q96NL6 688 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 AGO4Q9HCK5 861 aaKnown RBP15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 VPS45Q9NRW7 570 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 LAMA1P25391 3075 aa15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 MTCL1Q9Y4B5 1905 aaKnown RBP15.29■□□□□ 0.04
PCOLCE-202ENST00000460002 CCL16O15467 120 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 MAGEB2O15479 319 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 HNRNPA1P09651 372 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 SKIP12755 728 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 CSRP1P21291 193 aaKnown RBP15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 PTGDRQ13258 359 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 NMIQ13287 307 aaPredicted RBP15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 GRM2Q14416 872 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 Q6ZS52 159 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 CACNA2D4Q7Z3S7 1137 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 ZNF710Q8N1W2 664 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 EVI5LQ96CN4 794 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 RBM12Q9NTZ6 932 aaKnown RBP15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 HCFC1R1Q9NWW0 138 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 FNIP2Q9P278 1114 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 FBXW11Q9UKB1 542 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 PCDHA6Q9UN73 950 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 POLIQ9UNA4 740 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 PCDHA8Q9Y5H6 950 aa15.28■□□□□ 0.04
PCOLCE-202ENST00000460002 COL4A2P08572 1712 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 TMOD1P28289 359 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 HOXA6P31267 233 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 OR1G1P47890 313 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 DAB2IPQ5VWQ8 1189 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 GAB3Q8WWW8 586 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 NLRP7Q8WX94 980 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 MCRS1Q96EZ8 462 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 BRD9Q9H8M2 597 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 PIN4Q9Y237 131 aaKnown RBP15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
PCOLCE-202ENST00000460002 C8AP07357 584 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 MX1P20591 662 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 KIF5BP33176 963 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 RAB27AP51159 221 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 PPM1LQ5SGD2 360 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 COLGALT2Q8IYK4 626 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 ELSPBP1Q96BH3 223 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 PGBD4Q96DM1 585 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 GPR62Q9BZJ7 368 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 RSAD1Q9HA92 442 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 LY9Q9HBG7 655 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 SENP2Q9HC62 589 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 KANSL3Q9P2N6 904 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 DNMT3BQ9UBC3 853 aaKnown RBP15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 KCNH3Q9ULD8 1083 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 PCDHB2Q9Y5E7 798 aa15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 MAFBQ9Y5Q3 323 aaPredicted RBP15.26■□□□□ 0.03
PCOLCE-202ENST00000460002 SPDYE3A6NKU9 549 aa15.25■□□□□ 0.03
PCOLCE-202ENST00000460002 NRG2O14511 850 aaPredicted RBP15.25■□□□□ 0.03
PCOLCE-202ENST00000460002 RPP40O75818 363 aaKnown RBP15.25■□□□□ 0.03
PCOLCE-202ENST00000460002 MS4A1P11836 297 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms