RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 AMACRQ9UHK6 382 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 CNOT7Q9UIV1 285 aaKnown RBP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ZNRF3Q9ULT6 936 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC3-202ENST00000459727 PCDHAC2Q9Y5I4 1007 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ZHX2Q9Y6X8 837 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 SCN9AQ15858 1988 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 PASKQ96RG2 1323 aa9.53□□□□□ -0.88
HDAC3-202ENST00000459727 ZSCAN5CA6NGD5 496 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 YDJCA8MPS7 323 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 H0YGN5 161 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 FOXN3O00409 490 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 TTI1O43156 1089 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 FTLP02792 175 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 CYP1A2P05177 515 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 VCAM1P19320 739 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 ABCB4P21439 1286 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 GARTP22102 1010 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 RPS12P25398 132 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 CCND2P30279 289 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 SLC1A1P43005 524 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 PPP2R2AP63151 447 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 JAG1P78504 1218 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 CDR2Q01850 454 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 POU5F1Q01860 360 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 GCNT1Q02742 428 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 PDCLQ13371 301 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 PRPF4BQ13523 1007 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 RRP1BQ14684 758 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 ARHGAP44Q17R89 818 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 KIAA1755Q5JYT7 1200 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 PHLDB3Q6NSJ2 640 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 GJB7Q6PEY0 223 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 TAOK1Q7L7X3 1001 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 GPIHBP1Q8IV16 184 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 OTUD6BQ8N6M0 293 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 C12orf50Q8NA57 414 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 BBOF1Q8ND07 529 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 OLIG1Q8TAK6 271 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 GRK7Q8WTQ7 553 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 PGM2Q96G03 612 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 UIMC1Q96RL1 719 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 NTPCRQ9BSD7 190 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 ZNF341Q9BYN7 854 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 THAP2Q9H0W7 228 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 PABPC3Q9H361 631 aaKnown RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 AS3MTQ9HBK9 375 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 VEZTQ9HBM0 779 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 SLC38A10Q9HBR0 1119 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 AVENQ9NQS1 362 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 AJAP1Q9UKB5 411 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-202ENST00000459727 ALG6Q9Y672 507 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 NFS1Q9Y697 457 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 FAM169AQ9Y6X4 670 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
HDAC3-202ENST00000459727 GOLGA6L7A0A1B0GV03 622 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 CLRN2A0PK11 232 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 GMNCA6NCL1 334 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 MEFVO15553 781 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 DHX15O43143 795 aaKnown RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 DAPK3O43293 454 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 LRRN2O75325 713 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 DGAT1O75907 488 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 AGTP01019 485 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 CETN2P41208 172 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 RWDD2BP57060 319 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 RNASE9P60153 205 aaKnown RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 CALCOCO2Q13137 446 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 COG2Q14746 738 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 SNRNP35Q16560 246 aaKnown RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 KRT71Q3SY84 523 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 BRDTQ58F21 947 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 XKR9Q5GH70 373 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 C6orf118Q5T5N4 469 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 DCAF15Q66K64 600 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 TRMT10CQ7L0Y3 403 aaKnown RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 NLRP14Q86W24 1093 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 JAMLQ86YT9 394 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 CCHCR1Q8TD31 782 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 SYTL5Q8TDW5 730 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 ZBED3Q96IU2 234 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 FBXL18Q96ME1 805 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 TXLNGYQ9BZA5 131 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 FOXP3Q9BZS1 431 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 ROPN1BQ9BZX4 212 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 NSRP1Q9H0G5 558 aaKnown RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 ROPN1Q9HAT0 212 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 OSGEPQ9NPF4 335 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 C1orf112Q9NSG2 853 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 WRAP73Q9P2S5 460 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-202ENST00000459727 PPP1R9AQ9ULJ8 1098 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 TBX20Q9UMR3 447 aa9.51□□□□□ -0.89
HDAC3-202ENST00000459727 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms