RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 LIG4P49917 911 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 NLRP12P59046 1061 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 OSTNP61366 133 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 DPCR1Q3MIW9 517 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ZSCAN23Q3MJ62 389 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ATF7IP2Q5U623 682 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 SLC39A4Q6P5W5 647 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 SASS6Q6UVJ0 657 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 MYOCDQ8IZQ8 938 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 RNF169Q8NCN4 708 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ZSWIM2Q8NEG5 633 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 LINC01599Q8WXQ3 324 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 SYAP1Q96A49 352 aaPredicted RBP9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 EEF2KMTQ96G04 330 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 NFKBIZQ9BYH8 718 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 HAPLN2Q9GZV7 340 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 RNF39Q9H2S5 420 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 SEMA6BQ9H3T3 888 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 PDZD7Q9H5P4 517 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 IL23AQ9NPF7 189 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 AGPAT5Q9NUQ2 364 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 ANKFY1Q9P2R3 1169 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 KCNG1Q9UIX4 513 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 HES2Q9Y543 173 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 PHLPP2Q6ZVD8 1323 aa9.52□□□□□ -0.89
CLTCL1-204ENST00000458188 A0A1B0GUA9 196 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 GOLGA8IPA6NC78 632 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 TRIM49BA6NDI0 452 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 GOLGA8JA6NMD2 632 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 H0YCG3 227 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 TNFRSF10AO00220 468 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 HNRNPDLO14979 420 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 UPP2O95045 317 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 FGBP02675 491 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 PMS1P54277 932 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 NCBP1Q09161 790 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 DSC3Q14574 896 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 FAM187BQ17R55 369 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 KNOP1Q1ED39 458 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 UBXN11Q5T124 520 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 TWF2Q6IBS0 349 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 FAM117BQ6P1L5 589 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 PPP4R3CPQ6ZMV5 832 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 RBM43Q6ZSC3 357 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 STXBP4Q6ZWJ1 553 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 MAP4K3Q8IVH8 894 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 TMEM192Q8IY95 271 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 THNSL1Q8IYQ7 743 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 RPUSD2Q8IZ73 545 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 ADSSL1Q8N142 457 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 CEP120Q8N960 986 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 LPPQ93052 612 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 SAAL1Q96ER3 474 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 CDX2Q99626 313 aaPredicted RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 CBWD1Q9BRT8 395 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 MRPL4Q9BYD3 311 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 ST6GALNAC4Q9H4F1 302 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 CTNND2Q9UQB3 1225 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 MYH9P35579 1960 aaKnown RBP9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 DNAH12Q6ZR08 3092 aa9.51□□□□□ -0.89
CLTCL1-204ENST00000458188 ZMYM2Q9UBW7 1377 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 MEIS3P2A8K0S8 358 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 EIF3DO15371 548 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 AKAP5P24588 427 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 ADSSP30520 456 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 RFC2P35250 354 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 TNFSF9P41273 254 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 CYP2J2P51589 502 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 DEFB103AP81534 67 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 TYRO3Q06418 890 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 PPIGQ13427 754 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 IKBKEQ14164 716 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 TMEM240Q5SV17 173 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 C9orf50Q5SZB4 431 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 NOTUMQ6P988 496 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 CNKSR3Q6P9H4 555 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 C11orf57Q6ZUT1 292 aaPredicted RBP9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 GUF1Q8N442 669 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 NELFBQ8WX92 580 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 POMGNT1Q8WZA1 660 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 CDT1Q9H211 546 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 CXCL16Q9H2A7 254 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 KCTD10Q9H3F6 313 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 NXF3Q9H4D5 531 aaKnown RBP9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 TMEM206Q9H813 350 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 PTPRHQ9HD43 1115 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 SNTG2Q9NY99 539 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 KLK14Q9P0G3 267 aa9.5□□□□□ -0.89
CLTCL1-204ENST00000458188 CXXC1Q9P0U4 656 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms