RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 GLIS3Q8NEA6 775 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 SMARCE1Q969G3 411 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 CCDC47Q96A33 483 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 CPB2Q96IY4 423 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 TARS2Q9BW92 718 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 MRPL4Q9BYD3 311 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 ELAC1Q9H777 363 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 SLC39A2Q9NP94 309 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 EXOC1Q9NV70 894 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 USP20Q9Y2K6 914 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 STYXL1Q9Y6J8 313 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 COL4A6Q14031 1691 aa12.92□□□□□ -0.34
TRAPPC12-212ENST00000457845 A0A1W2PPC1 479 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 N4BP3O15049 544 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 TOM1L1O75674 476 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 RAB27AP51159 221 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 DEFB103AP81534 67 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 CAMK4Q16566 473 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 COBLL1Q53SF7 1204 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 ATF7IP2Q5U623 682 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 EEF1DP3Q658K8 133 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 SLC39A4Q6P5W5 647 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 SLC27A1Q6PCB7 646 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 STXBP4Q6ZWJ1 553 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 MRPL10Q7Z7H8 261 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 ZNF598Q86UK7 904 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 TDHQ8IZJ6 230 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 ACCSQ96QU6 501 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 GTPBP4Q9BZE4 634 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 NUP62CLQ9H1M0 184 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 MTIF3Q9H2K0 278 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 PDZD7Q9H5P4 517 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 TMEM206Q9H813 350 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 FAM105AQ9NUU6 356 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 NLRC5Q86WI3 1866 aa12.91□□□□□ -0.34
TRAPPC12-212ENST00000457845 KIAA1671Q9BY89 1806 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 EOMESO95936 686 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 AMHP03971 560 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 SKIP12755 728 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 ATF7P17544 494 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 MORC3Q14149 939 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 ZNF658Q5TYW1 1059 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 ECHDC2Q86YB7 292 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 SMG8Q8ND04 991 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 TMEM161AQ9NX61 479 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 MAN1B1Q9UKM7 699 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 EXOC7Q9UPT5 735 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 SLC4A7Q9Y6M7 1214 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 ZMYM2Q9UBW7 1377 aa12.9□□□□□ -0.34
TRAPPC12-212ENST00000457845 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 ANKRD63C9JTQ0 380 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 BMP6P22004 513 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 KCNJ6P48051 423 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 SNRPFP62306 86 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 MCL1Q07820 350 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 KLHL40Q2TBA0 621 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 DCAF4L1Q3SXM0 396 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 MPZL3Q6UWV2 235 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 NPAS4Q8IUM7 802 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 GUF1Q8N442 669 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 TRIML1Q8N9V2 468 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 TMEM174Q8WUU8 243 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 ZBTB45Q96K62 511 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 ADPGKQ9BRR6 497 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 CDT1Q9H211 546 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 IKZF4Q9H2S9 585 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 RC3H2Q9HBD1 1191 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 IPPQ9Y573 584 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 TRIOBPQ9H2D6 2365 aa12.89□□□□□ -0.35
TRAPPC12-212ENST00000457845 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 A0A0B4J269 797 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 CLDN3O15551 220 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 GJB5O95377 273 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 NPTXRO95502 500 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 STAG3L1P0CL83 205 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 MCF2P10911 925 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 ADSSP30520 456 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 LIG4P49917 911 aa12.88□□□□□ -0.35
TRAPPC12-212ENST00000457845 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms