RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 BCRP11274 1271 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 RARRES1P49788 294 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 ARHGAP44Q17R89 818 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 BMT2Q1RMZ1 405 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 MOB2Q70IA6 237 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 HAUS2Q9NVX0 235 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 PARP14Q460N5 1801 aa13.42□□□□□ -0.26
LINC00959-201ENST00000456581 EVI5O60447 810 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 NR3C2P08235 984 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 CBWD3Q5JTY5 395 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 KIFC3Q9BVG8 833 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 HMGB1P1B2RPK0 211 aaPredicted RBP13.41□□□□□ -0.26
LINC00959-201ENST00000456581 GAP43P17677 238 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 DSG3P32926 999 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 QARSP47897 775 aaKnown RBP13.41□□□□□ -0.26
LINC00959-201ENST00000456581 MARCKSL1P49006 195 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 ZNF131P52739 623 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 KRT71Q3SY84 523 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 B4GALNT4Q76KP1 1039 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 APOBEC3FQ8IUX4 373 aaKnown RBP13.41□□□□□ -0.26
LINC00959-201ENST00000456581 CD302Q8IX05 232 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 SLC35G2Q8TBE7 412 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 RAPGEF5Q92565 580 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 NCAPGQ9BPX3 1015 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 ACP6Q9NPH0 428 aa13.41□□□□□ -0.26
LINC00959-201ENST00000456581 TMEM110-MUSTN1A8MSY1 372 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 K7ENM7 598 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 USP2O75604 605 aaPredicted RBP13.4□□□□□ -0.26
LINC00959-201ENST00000456581 FAM107AO95990 144 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 YWHABP31946 246 aaKnown RBP13.4□□□□□ -0.26
LINC00959-201ENST00000456581 C6orf89Q6UWU4 347 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 A1CFQ9NQ94 594 aaKnown RBP13.4□□□□□ -0.26
LINC00959-201ENST00000456581 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 TLDC2A0PJX2 215 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 JAM2P57087 298 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 GHRHRQ02643 423 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 VGLL4Q14135 290 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 E2F5Q15329 346 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 ZNF746Q6NUN9 644 aaPredicted RBP13.4□□□□□ -0.26
LINC00959-201ENST00000456581 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 FAM186BQ8IYM0 893 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 BORCS6Q96GS4 357 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 THAP2Q9H0W7 228 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 SLC40A1Q9NP59 571 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 COG5Q9UP83 839 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
LINC00959-201ENST00000456581 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.27
LINC00959-201ENST00000456581 CAND2O75155 1236 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 CNTN2Q02246 1040 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 VSIG10LQ86VR7 867 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 SYCP3Q8IZU3 236 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 GPC2Q8N158 579 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 ATP8B4Q8TF62 1192 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 ALG3Q92685 438 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 FHDC1Q9C0D6 1143 aaPredicted RBP13.4□□□□□ -0.27
LINC00959-201ENST00000456581 AS3MTQ9HBK9 375 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 AFG3L2Q9Y4W6 797 aa13.4□□□□□ -0.27
LINC00959-201ENST00000456581 PHIPQ8WWQ0 1821 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
LINC00959-201ENST00000456581 LMNB1P20700 586 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
LINC00959-201ENST00000456581 SLCO1A2P46721 670 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 CATSPERGQ6ZRH7 1159 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 SLC20A1Q8WUM9 679 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 SNX24Q9Y343 169 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 SLC16A4O15374 487 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 ZNF862O60290 1169 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 FSBPO95073 299 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 DLG4P78352 724 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
LINC00959-201ENST00000456581 XKR9Q5GH70 373 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00959-201ENST00000456581 C18orf8Q96DM3 657 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
LINC00959-201ENST00000456581 GMNCA6NCL1 334 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 F8VZ95 297 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 EIF3DO15371 548 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC00959-201ENST00000456581 PLTPP55058 493 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 PEX3P56589 373 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 ANO5Q75V66 913 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
LINC00959-201ENST00000456581 KRT35Q92764 455 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 FAM212AQ96EL1 285 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 CLMNQ96JQ2 1002 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 PBKQ96KB5 322 aa13.38□□□□□ -0.27
LINC00959-201ENST00000456581 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms